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Aliases for RNVU1-18 Gene

Subcategory (RNA class) for RNVU1-18 Gene


Quality Score for this RNA gene is


Aliases for RNVU1-18 Gene

  • RNA, Variant U1 Small Nuclear 18 2 3 5
  • RNA, U1 Small Nuclear 25, Pseudogene 2 3
  • RNA, U1 Small Nuclear Pseudogene 1 2 3
  • RNA, U1 Small Nuclear 5 2 3
  • RNA, U1 Small Nuclear Pseudogene 9 3
  • RNA, U1 Small Nuclear 25 2
  • RNU1-25P 3
  • RNU1-25 3
  • RNU1P1 3
  • RNU1-5 3
  • RNU1P9 3
  • U1P101 3
  • VU1.18 3
  • U1.15 3
  • U1P15 3

External Ids for RNVU1-18 Gene

ORGUL Members for RNVU1-18 Gene

Previous HGNC Symbols for RNVU1-18 Gene

  • RNU1P1
  • RNU1-5
  • RNU1-25
  • RNU1-25P

Previous GeneCards Identifiers for RNVU1-18 Gene

  • GC01M149227

Summaries for RNVU1-18 Gene

GeneCards Summary for RNVU1-18 Gene

RNVU1-18 (RNA, Variant U1 Small Nuclear 18) is an RNA Gene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNVU1-18 Gene

Genomics for RNVU1-18 Gene

Regulatory Elements for RNVU1-18 Gene

Enhancers for RNVU1-18 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RNVU1-18 on UCSC Golden Path with GeneCards custom track

Promoters for RNVU1-18 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RNVU1-18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNVU1-18 Gene

143,729,407 bp from pter
143,729,570 bp from pter
164 bases
Minus strand

Genomic View for RNVU1-18 Gene

Genes around RNVU1-18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNVU1-18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNVU1-18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNVU1-18 Gene

Proteins for RNVU1-18 Gene

Post-translational modifications for RNVU1-18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNVU1-18 Gene

Domains & Families for RNVU1-18 Gene

Gene Families for RNVU1-18 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNVU1-18: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNVU1-18 Gene

Function for RNVU1-18 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNVU1-18 Gene

Localization for RNVU1-18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNVU1-18 Gene

Pathways & Interactions for RNVU1-18 Gene

SuperPathways for RNVU1-18 Gene

No Data Available

Interacting Proteins for RNVU1-18 Gene

Gene Ontology (GO) - Biological Process for RNVU1-18 Gene


No data available for Pathways by source and SIGNOR curated interactions for RNVU1-18 Gene

Drugs & Compounds for RNVU1-18 Gene

No Compound Related Data Available

Transcripts for RNVU1-18 Gene

mRNA/cDNA for RNVU1-18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNVU1-18 Gene

No ASD Table

Relevant External Links for RNVU1-18 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNVU1-18 Gene

mRNA expression in normal human tissues for RNVU1-18 Gene

genes like me logo Genes that share expression patterns with RNVU1-18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNVU1-18 Gene

Orthologs for RNVU1-18 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNVU1-18 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia U1 36
  • 100 (a)
(Pan troglodytes)
Mammalia U1 36
  • 100 (a)
Species with no ortholog for RNVU1-18:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNVU1-18 Gene

Gene Tree for RNVU1-18 (if available)
Gene Tree for RNVU1-18 (if available)

Paralogs for RNVU1-18 Gene

No data available for Paralogs for RNVU1-18 Gene

Variants for RNVU1-18 Gene

Sequence variations from dbSNP and Humsavar for RNVU1-18 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs366015 -- 143,729,729(-) AGCGG(A/G)TTCAG upstream-variant-2KB
rs368630 -- 143,731,172(+) CCCGC(C/T)AGTGT upstream-variant-2KB
rs502486 -- 143,730,838(+) tatat(A/G)ctcat upstream-variant-2KB
rs431394 -- 143,729,943(-) GGGCG(A/G)GAGGG upstream-variant-2KB
rs566634 -- 143,728,949(+) AGCCC(C/T)AAAGG downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for RNVU1-18 Gene

Disorders for RNVU1-18 Gene

No disorders were found for RNVU1-18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNVU1-18 Gene

Publications for RNVU1-18 Gene

  1. Differentially expressed, variant U1 snRNAs regulate gene expression in human cells. (PMID: 23070852) O'Reilly D. … Murphy S. (Genome Res. 2013) 2 3 67
  2. Human U1 small nuclear RNA genes: extensive conservation of flanking sequences suggests cycles of gene amplification and transposition. (PMID: 3837185) Bernstein L.B. … Weiner A.M. (Mol. Cell. Biol. 1985) 3
  3. Human U1 RNA pseudogenes may be generated by both DNA- and RNA-mediated mechanisms. (PMID: 6085956) Denison R.A. … Weiner A.M. (Mol. Cell. Biol. 1982) 3
  4. Human U1 loci: genes for human U1 RNA have dramatically similar genomic environments. (PMID: 6179629) Manser T. … Gesteland R.F. (Cell 1982) 3

Products for RNVU1-18 Gene

Sources for RNVU1-18 Gene