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Aliases for RNVU1-11 Gene

Subcategory (RNA class) for RNVU1-11 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RNVU1-11 Gene

  • RNA, Variant U1 Small Nuclear 11 2 3
  • RNA, U1 Small Nuclear Pseudogene 2 2 3
  • RNA, U1 Small Nuclear 12 (Pseudogene) 3
  • RNA, U1 Small Nuclear 12, Pseudogene 2
  • U1 Spliceosomal RNA 5
  • RNU1-12P 3
  • VU1.11 3
  • RNU1P2 3
  • U1P2A 3
  • U1 5

External Ids for RNVU1-11 Gene

Previous HGNC Symbols for RNVU1-11 Gene

  • RNU1P2
  • RNU1-12P

Previous GeneCards Identifiers for RNVU1-11 Gene

  • GC01M147863
  • GC01U904935

Summaries for RNVU1-11 Gene

GeneCards Summary for RNVU1-11 Gene

RNVU1-11 (RNA, Variant U1 Small Nuclear 11) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RNVU1-11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNVU1-11 Gene

Genomics for RNVU1-11 Gene

Regulatory Elements for RNVU1-11 Gene

Enhancers for RNVU1-11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H144545 0.2 Ensembl 0.4 +5.9 5938 2.8 RNVU1-11 ENSG00000275291
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNVU1-11 on UCSC Golden Path with GeneCards custom track

Promoters for RNVU1-11 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000012769 439 1401

Genomic Locations for RNVU1-11 Gene

Genomic Locations for RNVU1-11 Gene
chr1:144,551,671-144,552,339
(GRCh38/hg38)
Size:
669 bases
Orientation:
Minus strand
chr1:147,860,642-147,860,803
(GRCh37/hg19)

Genomic View for RNVU1-11 Gene

Genes around RNVU1-11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNVU1-11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNVU1-11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNVU1-11 Gene

Proteins for RNVU1-11 Gene

Post-translational modifications for RNVU1-11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNVU1-11 Gene

Domains & Families for RNVU1-11 Gene

Gene Families for RNVU1-11 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNVU1-11: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNVU1-11 Gene

Function for RNVU1-11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNVU1-11 Gene

Localization for RNVU1-11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNVU1-11 Gene

Pathways & Interactions for RNVU1-11 Gene

SuperPathways for RNVU1-11 Gene

No Data Available

Interacting Proteins for RNVU1-11 Gene

Gene Ontology (GO) - Biological Process for RNVU1-11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNVU1-11 Gene

Drugs & Compounds for RNVU1-11 Gene

No Compound Related Data Available

Transcripts for RNVU1-11 Gene

mRNA/cDNA for RNVU1-11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNVU1-11 Gene

No ASD Table

Relevant External Links for RNVU1-11 Gene

GeneLoc Exon Structure for
RNVU1-11
ECgene alternative splicing isoforms for
RNVU1-11

Expression for RNVU1-11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNVU1-11 Gene

genes like me logo Genes that share expression patterns with RNVU1-11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNVU1-11 Gene

Orthologs for RNVU1-11 Gene

Evolution for RNVU1-11 Gene

ENSEMBL:
Gene Tree for RNVU1-11 (if available)
TreeFam:
Gene Tree for RNVU1-11 (if available)

No data available for Orthologs for RNVU1-11 Gene

Paralogs for RNVU1-11 Gene

No data available for Paralogs for RNVU1-11 Gene

Variants for RNVU1-11 Gene

Relevant External Links for RNVU1-11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNVU1-11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNVU1-11 Gene

Disorders for RNVU1-11 Gene

Relevant External Links for RNVU1-11

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RNVU1-11

No disorders were found for RNVU1-11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNVU1-11 Gene

Publications for RNVU1-11 Gene

  1. Differentially expressed, variant U1 snRNAs regulate gene expression in human cells. (PMID: 23070852) O'Reilly D … Murphy S (Genome research 2013) 2 3 60
  2. Human U1 small nuclear RNA genes: extensive conservation of flanking sequences suggests cycles of gene amplification and transposition. (PMID: 3837185) Bernstein LB … Weiner AM (Molecular and cellular biology 1985) 2 3 60

Products for RNVU1-11 Gene

Sources for RNVU1-11 Gene

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