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Aliases for RNVU1-1 Gene

Subcategory (RNA class) for RNVU1-1 Gene


Quality Score for this RNA gene is


Aliases for RNVU1-1 Gene

  • RNA, Variant U1 Small Nuclear 1 2 3
  • RNA, Variant U1 Small Nuclear 10 2 3
  • RNA, U1 Small Nuclear 10, Pseudogene 2
  • RNA, U1 Small Nuclear Pseudogene 10 2
  • RNU1-10P 3
  • RNVU1-10 3
  • RNU1-53 3
  • RNU1P10 3
  • VU1.10 3
  • U1P14 3
  • VU1.1 3
  • U1.4 3

External Ids for RNVU1-1 Gene

ORGUL Members for RNVU1-1 Gene

Previous HGNC Symbols for RNVU1-1 Gene

  • RNU1P10
  • RNU1-10P
  • RNVU1-10

Previous GeneCards Identifiers for RNVU1-1 Gene

  • GC01M143656
  • GC01M143660

Summaries for RNVU1-1 Gene

GeneCards Summary for RNVU1-1 Gene

RNVU1-1 (RNA, Variant U1 Small Nuclear 1) is an RNA Gene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNVU1-1 Gene

Genomics for RNVU1-1 Gene

Genomic Location for RNVU1-1 Gene

148,362,370 bp from pter
148,362,533 bp from pter
164 bases
Minus strand

Genomic View for RNVU1-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNVU1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNVU1-1 Gene

No data available for Regulatory Elements for RNVU1-1 Gene

Proteins for RNVU1-1 Gene

Post-translational modifications for RNVU1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNVU1-1 Gene

Domains & Families for RNVU1-1 Gene

Gene Families for RNVU1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNVU1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNVU1-1 Gene

Function for RNVU1-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNVU1-1 Gene

Localization for RNVU1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNVU1-1 Gene

Pathways & Interactions for RNVU1-1 Gene

SuperPathways for RNVU1-1 Gene

No Data Available

Interacting Proteins for RNVU1-1 Gene

Gene Ontology (GO) - Biological Process for RNVU1-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RNVU1-1 Gene

Drugs & Compounds for RNVU1-1 Gene

No Compound Related Data Available

Transcripts for RNVU1-1 Gene

mRNA/cDNA for RNVU1-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNVU1-1 Gene

No ASD Table

Relevant External Links for RNVU1-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNVU1-1 Gene

mRNA expression in normal human tissues for RNVU1-1 Gene

genes like me logo Genes that share expression patterns with RNVU1-1: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNVU1-1 Gene

Orthologs for RNVU1-1 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNVU1-1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia U1 36
  • 96 (a)
(Canis familiaris)
Mammalia U1 36
  • 96 (a)
(Pan troglodytes)
Mammalia U1 36
  • 96 (a)
Species with no ortholog for RNVU1-1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNVU1-1 Gene

Gene Tree for RNVU1-1 (if available)
Gene Tree for RNVU1-1 (if available)

Paralogs for RNVU1-1 Gene

No data available for Paralogs for RNVU1-1 Gene

Variants for RNVU1-1 Gene

Sequence variations from dbSNP and Humsavar for RNVU1-1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs2992477 -- 148,362,820(+) TCTTC(C/T)GCCCC upstream-variant-2KB
rs3009462 -- 148,363,762(-) atctc(C/T)gacct upstream-variant-2KB
rs28404725 -- 148,363,857(+) GTCTA(G/T)CTGGT upstream-variant-2KB
rs28421390 -- 148,363,536(+) CCCCC(A/C)TCTCT upstream-variant-2KB
rs28453142 -- 148,364,037(+) TCCTG(C/T)AAAGG upstream-variant-2KB

Relevant External Links for RNVU1-1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNVU1-1 Gene

Disorders for RNVU1-1 Gene

genes like me logo Genes that share disorders with RNVU1-1: view

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNVU1-1 Gene

Publications for RNVU1-1 Gene

  1. Differentially expressed, variant U1 snRNAs regulate gene expression in human cells. (PMID: 23070852) O'Reilly D. … Murphy S. (Genome Res. 2013) 2 67
  2. Human U1 RNA pseudogenes may be generated by both DNA- and RNA-mediated mechanisms. (PMID: 6085956) Denison R.A. … Weiner A.M. (Mol. Cell. Biol. 1982) 2 67

Products for RNVU1-1 Gene

Sources for RNVU1-1 Gene

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