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Aliases for RNU7-96P Gene

Subcategory (RNA class) for RNU7-96P Gene

snRNA

Aliases for RNU7-96P Gene

  • RNA, U7 Small Nuclear 96 Pseudogene 2 3 5

External Ids for RNU7-96P Gene

ORGUL Members for RNU7-96P Gene

Previous GeneCards Identifiers for RNU7-96P Gene

  • GC02M098531

Summaries for RNU7-96P Gene

GeneCards Summary for RNU7-96P Gene

RNU7-96P (RNA, U7 Small Nuclear 96 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for RNU7-96P Gene

  • U7 small nuclear RNA: Animal histone pre-mRNAs are spliced by a different mechanism than nuclear pre-mRNAs and self-splicing introns. This processing involves the U7 snRNP, which contains only one RNA species: U7. The 5' end of U7 RNA is thought to base-pair to a conserved spacer element downstream of the cleavage site in histone pre-mRNA. This family contains a number of annotated U7 pseudogenes.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNU7-96P Gene

Genomics for RNU7-96P Gene

Regulatory Elements for RNU7-96P Gene

Enhancers for RNU7-96P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G097867 1.6 FANTOM5 Ensembl ENCODE 12.5 +43.0 42983 5.2 HDGF PKNOX1 FOXA2 MLX SIN3A ARID4B ZNF48 YY1 GATA2 CBX5 TMEM131 RNU7-96P ZAP70 ANKRD36B LINC01125 GC02M097914 GC02P097828
GH02G097966 1.3 Ensembl ENCODE dbSUPER 11.9 -53.8 -53848 0.3 FOXA2 BACH1 BMI1 ARID3A EED FOS ETV6 IKZF2 CREM SRF TMEM131 RNU7-96P VWA3B LINC01125
GH02G097949 1.1 Ensembl ENCODE dbSUPER 12 -37.8 -37836 2.0 CAVIN1 CEBPB RFX5 JUND EED NFYB MAFK EGR2 RNU7-96P TMEM131 VWA3B ACTR1B ANKRD36 LINC01125
GH02G097969 1.1 ENCODE dbSUPER 11.9 -57.1 -57063 1.5 SOX13 FOXA2 ZNF644 THRB RARA TEAD3 FOSL1 ZNF316 NR2F6 NFE2 TMEM131 RNU7-96P VWA3B ANKRD36B LINC01125
GH02G097944 0.9 dbSUPER 12 -32.0 -32028 2.3 HDAC1 ATF1 FOXA2 CBX3 PKNOX1 NFIB ZNF766 FOS CREM SMAD5 TMEM131 RNU7-96P VWA3B ANKRD36B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU7-96P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU7-96P Gene

Chromosome:
2
Start:
97,913,054 bp from pter
End:
97,913,117 bp from pter
Size:
64 bases
Orientation:
Minus strand

Genomic View for RNU7-96P Gene

Genes around RNU7-96P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-96P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-96P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-96P Gene

Proteins for RNU7-96P Gene

Post-translational modifications for RNU7-96P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-96P Gene

Domains & Families for RNU7-96P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-96P Gene

Function for RNU7-96P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-96P Gene

Localization for RNU7-96P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU7-96P Gene

Pathways & Interactions for RNU7-96P Gene

SuperPathways for RNU7-96P Gene

No Data Available

Interacting Proteins for RNU7-96P Gene

Gene Ontology (GO) - Biological Process for RNU7-96P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-96P Gene

Drugs & Compounds for RNU7-96P Gene

No Compound Related Data Available

Transcripts for RNU7-96P Gene

mRNA/cDNA for RNU7-96P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-96P Gene

No ASD Table

Relevant External Links for RNU7-96P Gene

GeneLoc Exon Structure for
RNU7-96P
ECgene alternative splicing isoforms for
RNU7-96P

Expression for RNU7-96P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-96P Gene

Orthologs for RNU7-96P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU7-96P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 35
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26409 35
  • 57 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U7 35
  • 54 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U7 35
  • 59 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U7 35
  • 60 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U7 35
  • 63 (a)
OneToMany
Species where no ortholog for RNU7-96P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU7-96P Gene

ENSEMBL:
Gene Tree for RNU7-96P (if available)
TreeFam:
Gene Tree for RNU7-96P (if available)

Paralogs for RNU7-96P Gene

No data available for Paralogs for RNU7-96P Gene

Variants for RNU7-96P Gene

Relevant External Links for RNU7-96P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-96P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-96P Gene

Disorders for RNU7-96P Gene

No disorders were found for RNU7-96P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-96P Gene

Publications for RNU7-96P Gene

No publications were found for RNU7-96P Gene.

Products for RNU7-96P Gene

Sources for RNU7-96P Gene

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