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Aliases for RNU7-96P Gene

Subcategory (RNA class) for RNU7-96P Gene

snRNA

Aliases for RNU7-96P Gene

  • RNA, U7 Small Nuclear 96 Pseudogene 2 3 5

External Ids for RNU7-96P Gene

ORGUL Members for RNU7-96P Gene

Previous GeneCards Identifiers for RNU7-96P Gene

  • GC02M098531

Summaries for RNU7-96P Gene

GeneCards Summary for RNU7-96P Gene

RNU7-96P (RNA, U7 Small Nuclear 96 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for RNU7-96P Gene

  • U7 small nuclear RNA: Animal histone pre-mRNAs are spliced by a different mechanism than nuclear pre-mRNAs and self-splicing introns. This processing involves the U7 snRNP, which contains only one RNA species: U7. The 5' end of U7 RNA is thought to base-pair to a conserved spacer element downstream of the cleavage site in histone pre-mRNA. This family contains a number of annotated U7 pseudogenes.

Additional gene information for RNU7-96P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNU7-96P Gene

Genomics for RNU7-96P Gene

GeneHancer (GH) Regulatory Elements for RNU7-96P Gene

Promoters and enhancers for RNU7-96P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I097910 Enhancer 1.3 Ensembl ENCODE dbSUPER 550.8 +1.8 1845 1.7 PKNOX1 ATF1 ARNT IRF4 TCF12 ATF7 RUNX3 NCOA1 JUNB ZNF184 RNU7-96P GC02M097914 GC02P097828 TMEM131
GH02I097867 Enhancer 1.4 FANTOM5 Ensembl ENCODE 12.5 +43.0 42983 5.2 PKNOX1 ARID4B SIN3A IRF4 YY1 ZNF280A ATF7 FOS RUNX3 RXRA TMEM131 RNU7-96P ZAP70 ANKRD36B C2orf92 GC02M097914 GC02P097828
GH02I097966 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.9 -53.8 -53847 0.3 FOXA2 BACH1 BMI1 BATF IRF4 ETV6 FOS IKZF2 RUNX3 SRF TMEM131 RNU7-96P VWA3B C2orf92
GH02I097969 Enhancer 1 ENCODE dbSUPER 11.9 -57.1 -57063 1.5 SOX13 FOXA2 ZNF644 THRB RARA TEAD3 FOSL1 ZNF316 NR2F6 NFE2 TMEM131 RNU7-96P VWA3B ANKRD36B C2orf92
GH02I097949 Enhancer 0.9 Ensembl ENCODE dbSUPER 12 -37.8 -37836 2 JUND CAVIN1 NFYB CEBPB EBF1 ZNF592 RFX5 RNU7-96P TMEM131 VWA3B ACTR1B ANKRD36 C2orf92
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-96P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-96P Gene

Genomic Locations for RNU7-96P Gene
chr2:97,913,054-97,913,117
(GRCh38/hg38)
Size:
64 bases
Orientation:
Minus strand
chr2:98,529,517-98,529,580
(GRCh37/hg19)

Genomic View for RNU7-96P Gene

Genes around RNU7-96P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-96P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-96P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-96P Gene

Proteins for RNU7-96P Gene

Post-translational modifications for RNU7-96P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-96P Gene

Domains & Families for RNU7-96P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-96P Gene

Function for RNU7-96P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-96P Gene

Localization for RNU7-96P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-96P Gene

Pathways & Interactions for RNU7-96P Gene

SuperPathways for RNU7-96P Gene

No Data Available

Interacting Proteins for RNU7-96P Gene

Gene Ontology (GO) - Biological Process for RNU7-96P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-96P Gene

Drugs & Compounds for RNU7-96P Gene

No Compound Related Data Available

Transcripts for RNU7-96P Gene

mRNA/cDNA for RNU7-96P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-96P Gene

No ASD Table

Relevant External Links for RNU7-96P Gene

GeneLoc Exon Structure for
RNU7-96P
ECgene alternative splicing isoforms for
RNU7-96P

Expression for RNU7-96P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-96P Gene

Orthologs for RNU7-96P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU7-96P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 34
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26409 34
  • 57 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U7 34
  • 54 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U7 34
  • 59 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U7 34
  • 60 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U7 34
  • 63 (a)
OneToMany
Species where no ortholog for RNU7-96P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU7-96P Gene

ENSEMBL:
Gene Tree for RNU7-96P (if available)
TreeFam:
Gene Tree for RNU7-96P (if available)

Paralogs for RNU7-96P Gene

No data available for Paralogs for RNU7-96P Gene

Variants for RNU7-96P Gene

Additional Variant Information for RNU7-96P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-96P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-96P Gene

Disorders for RNU7-96P Gene

No disorders were found for RNU7-96P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-96P Gene

Publications for RNU7-96P Gene

No publications were found for RNU7-96P Gene.

Products for RNU7-96P Gene

Sources for RNU7-96P Gene

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