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Aliases for RNU7-81P Gene

Subcategory (RNA class) for RNU7-81P Gene

snRNA

Aliases for RNU7-81P Gene

  • RNA, U7 Small Nuclear 81 Pseudogene 2 3 5
  • U7.81 3

External Ids for RNU7-81P Gene

ORGUL Members for RNU7-81P Gene

Previous GeneCards Identifiers for RNU7-81P Gene

  • GC02U901362
  • GC02P055077

Summaries for RNU7-81P Gene

GeneCards Summary for RNU7-81P Gene

RNU7-81P (RNA, U7 Small Nuclear 81 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-81P Gene

Genomics for RNU7-81P Gene

Regulatory Elements for RNU7-81P Gene

Enhancers for RNU7-81P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G054873 1.2 ENCODE dbSUPER 12 +23.0 23004 0.4 ATF1 FOXA2 ARID4B ZNF766 GATA2 ELK1 ZNF518A ZNF592 MEF2D CREB3 EML6 RTN4 RNU7-81P LOC105374667 GC02M054852 GC02P054889
GH02G054871 1.2 ENCODE dbSUPER 12 +21.8 21776 2.0 HDAC1 ATF1 PKNOX1 FOXA2 NFRKB ARID4B ZNF335 TCF12 ZNF766 GATA2 RNU7-81P RTN4 EML6 LOC105374667 GC02M054852 GC02P054889
GH02G054496 1.4 Ensembl ENCODE dbSUPER 10.1 -351.1 -351079 4.5 ARID4B SIN3A DMAP1 BMI1 ZNF2 RAD21 ZNF335 TCF12 ZNF121 SLC30A9 EML6 SPTBN1 C2orf73 ACYP2 RNU7-81P LOC105374667 PRORSD1P GC02M054483 GC02P054516
GH02G055163 1.4 Ensembl ENCODE dbSUPER 9.8 +313.3 313288 2.1 HDAC1 FOXA2 PKNOX1 NFIB ARNT SIN3A FEZF1 CHAMP1 ZNF766 SMARCA5 CLHC1 ENSG00000203327 RNU6-433P RTN4 RPS27A RNU7-81P EML6 PRORSD1P GC02M055160 LOC105374674
GH02G054878 1.2 ENCODE dbSUPER 11.2 +30.5 30505 3.7 FOXA2 PKNOX1 ATF1 ARNT ARID4B YY1 FOS ZNF263 SP5 MXD4 EML6 RTN4 RNU7-81P LOC105374667 GC02P054889 GC02M054852
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU7-81P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU7-81P Gene

Chromosome:
2
Start:
54,850,289 bp from pter
End:
54,850,352 bp from pter
Size:
64 bases
Orientation:
Plus strand

Genomic View for RNU7-81P Gene

Genes around RNU7-81P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-81P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-81P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-81P Gene

Proteins for RNU7-81P Gene

Post-translational modifications for RNU7-81P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-81P Gene

Domains & Families for RNU7-81P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-81P Gene

Function for RNU7-81P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-81P Gene

Localization for RNU7-81P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU7-81P Gene

Pathways & Interactions for RNU7-81P Gene

SuperPathways for RNU7-81P Gene

No Data Available

Interacting Proteins for RNU7-81P Gene

Gene Ontology (GO) - Biological Process for RNU7-81P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-81P Gene

Drugs & Compounds for RNU7-81P Gene

No Compound Related Data Available

Transcripts for RNU7-81P Gene

mRNA/cDNA for RNU7-81P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-81P Gene

No ASD Table

Relevant External Links for RNU7-81P Gene

GeneLoc Exon Structure for
RNU7-81P
ECgene alternative splicing isoforms for
RNU7-81P

Expression for RNU7-81P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-81P Gene

Orthologs for RNU7-81P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-81P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 35
  • 97 (a)
OneToOne
Species where no ortholog for RNU7-81P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-81P Gene

ENSEMBL:
Gene Tree for RNU7-81P (if available)
TreeFam:
Gene Tree for RNU7-81P (if available)

Paralogs for RNU7-81P Gene

No data available for Paralogs for RNU7-81P Gene

Variants for RNU7-81P Gene

Relevant External Links for RNU7-81P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-81P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-81P Gene

Disorders for RNU7-81P Gene

No disorders were found for RNU7-81P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-81P Gene

Publications for RNU7-81P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M. … Stadler P.F. (Genomics Proteomics Bioinformatics 2007) 2 3 64

Products for RNU7-81P Gene

Sources for RNU7-81P Gene

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