Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU7-72P Gene

Subcategory (RNA class) for RNU7-72P Gene

snRNA

Aliases for RNU7-72P Gene

  • RNA, U7 Small Nuclear 72 Pseudogene 2 3
  • U7.72 3

External Ids for RNU7-72P Gene

ORGUL Members for RNU7-72P Gene

Previous GeneCards Identifiers for RNU7-72P Gene

  • GC20U900369
  • GC20P048444

Summaries for RNU7-72P Gene

GeneCards Summary for RNU7-72P Gene

RNU7-72P (RNA, U7 Small Nuclear 72 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-72P Gene

Genomics for RNU7-72P Gene

Regulatory Elements for RNU7-72P Gene

Enhancers for RNU7-72P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G049850 0.8 ENCODE dbSUPER 12.5 +22.9 22883 0.2 PKNOX1 GATA3 NFIB ZBTB40 NR2C2 FOXA1 RNU7-72P LOC100421569 SPATA2 ENSG00000199490 SLC9A8 RNF114 PIR45177
GH20G049821 1.4 Ensembl ENCODE dbSUPER 0.4 -5.1 -5139 3.2 HDGF PKNOX1 FOXA2 YBX1 ZBTB40 RAD21 HSF1 FOS RELB IKZF2 B4GALT5 RNU6-919P SPATA2 PTGIS RNF114 SLC9A8 RNU7-72P
GH20G049810 1.4 ENCODE dbSUPER 0.4 -15.0 -14968 4.5 HDGF PKNOX1 FOXA2 CREB3L1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZBTB7B RNF114 SPATA2 ENSG00000232043 ARFGEF2 SLC9A8 RNU7-72P
GH20G049825 0.7 dbSUPER 0.7 -2.1 -2094 0.9 CTCF ARID4B BMI1 ZNF644 ZSCAN9 RAD21 YY1 TEAD3 ZNF316 HNF4G B4GALT5 RNU6-919P PTGIS RNU7-72P SLC9A8
GH20G049818 0.6 dbSUPER 0.4 -9.0 -9043 1.9 ZNF146 HDAC2 FOXK2 SCRT2 ZMYM3 KDM1A SPATA2 RNU6-919P PTGIS RNF114 SLC9A8 RNU7-72P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU7-72P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU7-72P Gene

Chromosome:
20
Start:
49,827,996 bp from pter
End:
49,828,052 bp from pter
Size:
57 bases
Orientation:
Plus strand

Genomic View for RNU7-72P Gene

Genes around RNU7-72P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-72P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-72P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-72P Gene

Proteins for RNU7-72P Gene

Post-translational modifications for RNU7-72P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-72P Gene

Domains & Families for RNU7-72P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-72P Gene

Function for RNU7-72P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-72P Gene

Localization for RNU7-72P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU7-72P Gene

Pathways & Interactions for RNU7-72P Gene

SuperPathways for RNU7-72P Gene

No Data Available

Interacting Proteins for RNU7-72P Gene

Gene Ontology (GO) - Biological Process for RNU7-72P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-72P Gene

Drugs & Compounds for RNU7-72P Gene

No Compound Related Data Available

Transcripts for RNU7-72P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-72P Gene

No ASD Table

Relevant External Links for RNU7-72P Gene

GeneLoc Exon Structure for
RNU7-72P
ECgene alternative splicing isoforms for
RNU7-72P

No data available for mRNA/cDNA for RNU7-72P Gene

Expression for RNU7-72P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-72P Gene

Orthologs for RNU7-72P Gene

No data available for Orthologs and Evolution for RNU7-72P Gene

Paralogs for RNU7-72P Gene

No data available for Paralogs for RNU7-72P Gene

Variants for RNU7-72P Gene

Relevant External Links for RNU7-72P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-72P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-72P Gene

Disorders for RNU7-72P Gene

No disorders were found for RNU7-72P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-72P Gene

Publications for RNU7-72P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M. … Stadler P.F. (Genomics Proteomics Bioinformatics 2007) 2 3 64

Products for RNU7-72P Gene

Sources for RNU7-72P Gene

Content
Loading form....