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Aliases for RNU7-65P Gene

Subcategory (RNA class) for RNU7-65P Gene

snRNA

Aliases for RNU7-65P Gene

  • RNA, U7 Small Nuclear 65 Pseudogene 2 3
  • U7.65 3

External Ids for RNU7-65P Gene

ORGUL Members for RNU7-65P Gene

Previous GeneCards Identifiers for RNU7-65P Gene

  • GC06U901250

Summaries for RNU7-65P Gene

GeneCards Summary for RNU7-65P Gene

RNU7-65P (RNA, U7 Small Nuclear 65 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for RNU7-65P Gene - the ORGUL cluster for this gene includes several descriptions:

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

  • U7 small nuclear RNA: Animal histone pre-mRNAs are spliced by a different mechanism than nuclear pre-mRNAs and self-splicing introns. This processing involves the U7 snRNP, which contains only one RNA species: U7. The 5' end of U7 RNA is thought to base-pair to a conserved spacer element downstream of the cleavage site in histone pre-mRNA. This family contains a number of annotated U7 pseudogenes.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNU7-65P Gene

Genomics for RNU7-65P Gene

Genomic Location for RNU7-65P Gene

Start:
49,344,800 bp from pter
End:
49,344,861 bp from pter
Size:
62 bases
Orientation:
Minus strand

Genomic View for RNU7-65P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNU7-65P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-65P Gene

ORGUL Member Location for RNU7-65P Gene

ORGUL Member Location for RNU7-65P gene

No data available for Regulatory Elements for RNU7-65P Gene

Proteins for RNU7-65P Gene

Post-translational modifications for RNU7-65P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-65P Gene

Domains for RNU7-65P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-65P Gene

Function for RNU7-65P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNU7-65P Gene

Localization for RNU7-65P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU7-65P Gene

Pathways for RNU7-65P Gene

SuperPathways for RNU7-65P Gene

No Data Available

Interacting Proteins for RNU7-65P Gene

Gene Ontology (GO) - Biological Process for RNU7-65P Gene

None

No data available for Pathways by source for RNU7-65P Gene

Transcripts for RNU7-65P Gene

mRNA/cDNA for RNU7-65P Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-65P Gene

No ASD Table

Relevant External Links for RNU7-65P Gene

GeneLoc Exon Structure for
RNU7-65P
ECgene alternative splicing isoforms for
RNU7-65P

Expression for RNU7-65P Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RNU7-65P Gene

Orthologs for RNU7-65P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-65P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 36
  • 100 (a)
OneToOne
Species with no ortholog for RNU7-65P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-65P Gene

ENSEMBL:
Gene Tree for RNU7-65P (if available)
TreeFam:
Gene Tree for RNU7-65P (if available)

Paralogs for RNU7-65P Gene

No data available for Paralogs for RNU7-65P Gene

Variants for RNU7-65P Gene

Relevant External Links for RNU7-65P Gene

HapMap Linkage Disequilibrium report
RNU7-65P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RNU7-65P Gene

Disorders for RNU7-65P Gene

No disorders were found for RNU7-65P Gene.

No data available for UniProtKB/Swiss-Prot for RNU7-65P Gene

Publications for RNU7-65P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M. … Stadler P.F. (Genomics Proteomics Bioinformatics 2007) 2 3

Products for RNU7-65P Gene

Sources for RNU7-65P Gene

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