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Aliases for RNU7-5P Gene

Subcategory (RNA class) for RNU7-5P Gene

snRNA

Aliases for RNU7-5P Gene

  • RNA, U7 Small Nuclear 5 Pseudogene 2 3
  • U7.5 3

External Ids for RNU7-5P Gene

ORGUL Members for RNU7-5P Gene

Previous GeneCards Identifiers for RNU7-5P Gene

  • GC15U900874
  • GC15M045739
  • GC15M022562

Summaries for RNU7-5P Gene

GeneCards Summary for RNU7-5P Gene

RNU7-5P (RNA, U7 Small Nuclear 5 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU7-5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-5P Gene

Genomics for RNU7-5P Gene

GeneHancer (GH) Regulatory Elements for RNU7-5P Gene

Promoters and enhancers for RNU7-5P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I045444 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.4 374 2.8 KLF1 MAX EBF1 CEBPG ZIC2 ZNF335 SMC3 SMARCC2 PRDM10 E2F6 GC15M045447 GC15P045444 RNU7-5P C15orf48 SPG11 ENSG00000259563 SPATA5L1 SQOR ENSG00000259539 BLOC1S6
GH15I045400 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.3 +43.8 43821 3.4 PKNOX1 SMAD1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 SPATA5L1 GATM CTDSPL2 SPG11 C15orf48 ENSG00000259563 RNU7-5P SQOR DUOX2
GH15I045306 Enhancer 0.9 Ensembl ENCODE 9.6 +139.2 139242 1 GATAD2A CTCF ZNF654 NFIA RXRA TEAD1 TRIM22 REST RAD21 IKZF1 SHF SLC28A2 RNU7-5P SORD ENSG00000235390 LOC101928414
GH15I045604 Enhancer 0.6 ENCODE dbSUPER 11.4 -158.1 -158074 0.2 CEBPG SPI1 SQOR RNU7-5P ENSG00000200419 BLOC1S6 ENSG00000260170
GH15I045591 Enhancer 0.4 dbSUPER 10.5 -146.7 -146653 2.5 RCOR1 ZNF507 GC15P045592 ENSG00000200419 SLC30A4 RNU7-5P C15orf48 LOC101928414 ENSG00000260170 BLOC1S6 SQOR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-5P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-5P Gene

Genomic Locations for RNU7-5P Gene
chr15:45,446,465-45,446,524
(GRCh38/hg38)
Size:
60 bases
Orientation:
Minus strand
chr15:45,738,661-45,738,722
(GRCh37/hg19)

Genomic View for RNU7-5P Gene

Genes around RNU7-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-5P Gene

Proteins for RNU7-5P Gene

Post-translational modifications for RNU7-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-5P Gene

Domains & Families for RNU7-5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-5P Gene

Function for RNU7-5P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-5P Gene

Localization for RNU7-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-5P Gene

Pathways & Interactions for RNU7-5P Gene

SuperPathways for RNU7-5P Gene

No Data Available

Interacting Proteins for RNU7-5P Gene

Gene Ontology (GO) - Biological Process for RNU7-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-5P Gene

Drugs & Compounds for RNU7-5P Gene

No Compound Related Data Available

Transcripts for RNU7-5P Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-5P Gene

No ASD Table

Relevant External Links for RNU7-5P Gene

GeneLoc Exon Structure for
RNU7-5P
ECgene alternative splicing isoforms for
RNU7-5P

No data available for mRNA/cDNA for RNU7-5P Gene

Expression for RNU7-5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-5P Gene

Orthologs for RNU7-5P Gene

No data available for Orthologs and Evolution for RNU7-5P Gene

Paralogs for RNU7-5P Gene

No data available for Paralogs for RNU7-5P Gene

Variants for RNU7-5P Gene

Additional Variant Information for RNU7-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-5P Gene

Disorders for RNU7-5P Gene

No disorders were found for RNU7-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-5P Gene

Publications for RNU7-5P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M … Stadler PF (Genomics, proteomics & bioinformatics 2007) 2 3 58

Products for RNU7-5P Gene

Sources for RNU7-5P Gene

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