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Aliases for RNU7-5P Gene

Subcategory (RNA class) for RNU7-5P Gene

snRNA

Aliases for RNU7-5P Gene

  • RNA, U7 Small Nuclear 5 Pseudogene 2 3
  • RNA, Small Nuclear U7.5 Pseudogen 3
  • U7.5 3

External Ids for RNU7-5P Gene

ORGUL Members for RNU7-5P Gene

Previous GeneCards Identifiers for RNU7-5P Gene

  • GC15U900874
  • GC15M045739
  • GC15M022562

Summaries for RNU7-5P Gene

GeneCards Summary for RNU7-5P Gene

RNU7-5P (RNA, U7 Small Nuclear 5 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-5P Gene

Genomics for RNU7-5P Gene

Regulatory Elements for RNU7-5P Gene

Enhancers for RNU7-5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F045603 0.8 Ensembl ENCODE 11.4 -157.8 -157777 1.4 ATF3 SPI1 SQRDL RNU7-5P ENSG00000200419
GH15F045475 1.2 FANTOM5 11.3 -29.1 -29137 0.1 C15orf48 SLC30A4 RNU7-5P MIR147B SQRDL BLOC1S6 GC15M045480 GC15P045452
GH15F045476 0.9 ENCODE 11.3 -30.1 -30094 0.2 SLC30A4 RNU7-5P C15orf48 MIR147B GC15M045480 GC15P045452
GH15F045400 0.6 ENCODE 10.2 +43.8 43821 3.4 PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 SPATA5L1 CTDSPL2 C15orf48 EIF3J-AS1 HNRNPMP1 BLOC1S6 MIR147B RNU7-5P SQRDL DUOX2
GH15F045306 0.8 Ensembl ENCODE 9.6 +139.2 139243 1.0 GATAD2A CTCF ZNF654 NFIA TEAD1 TRIM22 RAD21 IKZF1 SMC3 TCF7 SHF SLC28A2 RNU7-5P SORD ENSG00000235390 LOC101928414
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNU7-5P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU7-5P Gene

Chromosome:
15
Start:
45,446,465 bp from pter
End:
45,446,524 bp from pter
Size:
60 bases
Orientation:
Minus strand

Genomic View for RNU7-5P Gene

Genes around RNU7-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-5P Gene

Proteins for RNU7-5P Gene

Post-translational modifications for RNU7-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-5P Gene

Domains & Families for RNU7-5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-5P Gene

Function for RNU7-5P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-5P Gene

Localization for RNU7-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU7-5P Gene

Pathways & Interactions for RNU7-5P Gene

SuperPathways for RNU7-5P Gene

No Data Available

Interacting Proteins for RNU7-5P Gene

Gene Ontology (GO) - Biological Process for RNU7-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-5P Gene

Transcripts for RNU7-5P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-5P Gene

No ASD Table

Relevant External Links for RNU7-5P Gene

GeneLoc Exon Structure for
RNU7-5P
ECgene alternative splicing isoforms for
RNU7-5P

No data available for mRNA/cDNA for RNU7-5P Gene

Expression for RNU7-5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU7-5P Gene

Orthologs for RNU7-5P Gene

No data available for Orthologs and Evolution for RNU7-5P Gene

Paralogs for RNU7-5P Gene

No data available for Paralogs for RNU7-5P Gene

Variants for RNU7-5P Gene

Relevant External Links for RNU7-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-5P Gene

Disorders for RNU7-5P Gene

No disorders were found for RNU7-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-5P Gene

Publications for RNU7-5P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M. … Stadler P.F. (Genomics Proteomics Bioinformatics 2007) 2 3 64

Products for RNU7-5P Gene

Sources for RNU7-5P Gene

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