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Aliases for RNU7-55P Gene

Subcategory (RNA class) for RNU7-55P Gene


Aliases for RNU7-55P Gene

  • RNA, U7 Small Nuclear 55 Pseudogene 2 3 5
  • RNA, Small Nuclear U7 Pseudogene 4 2 3
  • RNA, U7 Small Nuclear Pseudogene 4 3
  • HSU7.36 3
  • HSU7.55 3
  • RNU7P4 3
  • U7.55 3
  • U7 3

External Ids for RNU7-55P Gene

ORGUL Members for RNU7-55P Gene

Previous HGNC Symbols for RNU7-55P Gene

  • RNU7P4

Previous GeneCards Identifiers for RNU7-55P Gene

  • GC08M008968
  • GC08M007855

Summaries for RNU7-55P Gene

GeneCards Summary for RNU7-55P Gene

RNU7-55P (RNA, U7 Small Nuclear 55 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for RNU7-55P Gene - the ORGUL cluster for this gene includes several descriptions:

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

  • U7 small nuclear RNA: Animal histone pre-mRNAs are spliced by a different mechanism than nuclear pre-mRNAs and self-splicing introns. This processing involves the U7 snRNP, which contains only one RNA species: U7. The 5' end of U7 RNA is thought to base-pair to a conserved spacer element downstream of the cleavage site in histone pre-mRNA. This family contains a number of annotated U7 pseudogenes.

View fRNAdb secondary structures for RNU7-55P

Additional gene information for RNU7-55P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNU7-55P Gene

Genomics for RNU7-55P Gene

Regulatory Elements for RNU7-55P Gene

Enhancers for RNU7-55P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H009099 1.5 Ensembl ENCODE dbSUPER 12.3 -30.9 -30914 7.5 PKNOX1 FOXA2 ATF1 MLX ZFP64 FEZF1 YY1 TCF12 FOS SP5 FAM86B3P ERI1 RNU7-55P ENSG00000254340 ENSG00000253426 PPP1R3B PRAG1 RPL10P19 ENSG00000197334
GH08H009132 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -62.9 -62873 5 SCRT1 IRF2 JUN RAD21 YY1 OSR2 ZNF121 ZFHX2 JUND PRDM6 FAM86B3P RNU7-55P ENSG00000253252 ERI1 ENSG00000254340 ENSG00000197334
GH08H009095 1.2 ENCODE dbSUPER 12.3 -23.9 -23852 1.6 FOXA2 MLX ARID4B YY1 TCF12 SLC30A9 ATF7 SP5 REST MIER2 RNU7-55P RPL10P19 ENSG00000197334 ENSG00000254340
GH08H008751 1.4 FANTOM5 Ensembl ENCODE 10.2 +319.1 319140 2.9 PKNOX1 TBL1XR1 SIN3A ZBTB40 BATF ATF7 ETV6 RUNX3 IKZF2 CREM FAM86B3P MFHAS1 CLDN23 ENSG00000207244 RPL10P19 RNU7-55P PRAG1 ENSG00000254367 ENSG00000284717
GH08H009022 1 Ensembl ENCODE 12.1 +48.1 48083 4.3 PKNOX1 FOXA2 MAX FEZF1 EBF1 CEBPG RAD21 EED ATF7 RUNX3 ERI1 RNU7-55P ENSG00000253426 PPP1R3B ENSG00000254340 RPL10P19 MIR4660 LOC105379227
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU7-55P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-55P Gene

Genomic Locations for RNU7-55P Gene
62 bases
Minus strand

Genomic View for RNU7-55P Gene

Genes around RNU7-55P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-55P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-55P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-55P Gene

ORGUL Member Location for RNU7-55P Gene

ORGUL Member Location for RNU7-55P gene

Proteins for RNU7-55P Gene

Post-translational modifications for RNU7-55P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-55P Gene

Domains & Families for RNU7-55P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-55P Gene

Function for RNU7-55P Gene

Phenotypes From GWAS Catalog for RNU7-55P Gene

Phenotypes for RNU7-55P Gene

GenomeRNAi human phenotypes for RNU7-55P:
genes like me logo Genes that share phenotypes with RNU7-55P: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-55P Gene

Localization for RNU7-55P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-55P Gene

Pathways & Interactions for RNU7-55P Gene

SuperPathways for RNU7-55P Gene

No Data Available

Interacting Proteins for RNU7-55P Gene

Gene Ontology (GO) - Biological Process for RNU7-55P Gene


No data available for Pathways by source and SIGNOR curated interactions for RNU7-55P Gene

Drugs & Compounds for RNU7-55P Gene

No Compound Related Data Available

Transcripts for RNU7-55P Gene

fRNAdb Secondary structures for RNU7-55P Gene

  • RF00066;U7;M35540.1/229-290

mRNA/cDNA for RNU7-55P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-55P Gene

No ASD Table

Relevant External Links for RNU7-55P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNU7-55P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-55P Gene

Orthologs for RNU7-55P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-55P Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia U7 34
  • 98 (a)
Species where no ortholog for RNU7-55P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-55P Gene

Gene Tree for RNU7-55P (if available)
Gene Tree for RNU7-55P (if available)

Paralogs for RNU7-55P Gene

No data available for Paralogs for RNU7-55P Gene

Variants for RNU7-55P Gene

Relevant External Links for RNU7-55P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-55P Gene

Disorders for RNU7-55P Gene

Relevant External Links for RNU7-55P

Genetic Association Database (GAD)

No disorders were found for RNU7-55P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNU7-55P Gene

Publications for RNU7-55P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M … Stadler PF (Genomics, proteomics & bioinformatics 2007) 2 3 60
  2. Structures of four human pseudogenes for U7 small nuclear RNA. (PMID: 2249787) Soldati D … Schümperli D (Gene 1990) 2 3 60
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 45 60
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60
  5. 3' end processing of mouse histone pre-mRNA: evidence for additional base-pairing between U7 snRNA and pre-mRNA. (PMID: 7937126) Spycher C … Schümperli D (Nucleic acids research 1994) 1

Products for RNU7-55P Gene

Sources for RNU7-55P Gene

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