Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU7-24P Gene

Subcategory (RNA class) for RNU7-24P Gene

snRNA

Aliases for RNU7-24P Gene

  • RNA, U7 Small Nuclear 24 Pseudogene 2 3 5
  • RNA, Small Nuclear U7 Pseudogene 3 2 3
  • RNA, Small Nuclear U7.24 Pseudogene 3
  • RNA, U7 Small Nuclear Pseudogene 3 3
  • HSU7.24 3
  • HSU7.25 3
  • RNU7P3 3
  • U7.24 3
  • U7 3

External Ids for RNU7-24P Gene

ORGUL Members for RNU7-24P Gene

Previous HGNC Symbols for RNU7-24P Gene

  • RNU7P3

Previous GeneCards Identifiers for RNU7-24P Gene

  • GC16U900834
  • GC16M024320
  • GC16M024321

Summaries for RNU7-24P Gene

GeneCards Summary for RNU7-24P Gene

RNU7-24P (RNA, U7 Small Nuclear 24 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-24P Gene

Genomics for RNU7-24P Gene

Regulatory Elements for RNU7-24P Gene

Enhancers for RNU7-24P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F024343 0.6 ENCODE 11.1 +56.2 56218 0.9 GTF3C2 BDP1 POLR3A CEBPB TCF7L2 ENSG00000261723 PALB2 ENSG00000260751 DCTN5 RNU7-24P LCMT1-AS2 GC16P024338 GC16M024363
GH16F024419 1 FANTOM5 Ensembl 0.3 -19.8 -19821 0.3 PKNOX1 TAF1 FOSL1 ZBTB48 FOS NFE2 PRDM10 ZNF600 MTA2 NR2F1 RBBP6 RNU7-24P LOC105371143
GH16F024431 0.7 ENCODE 0.3 -31.0 -31018 0.2 SMARCC1 TAF1 JUN CEBPB USF2 EP300 RELA JUND ZBTB48 IKZF1 RNU7-24P LOC105371143
GH16F024483 0.5 ENCODE 0.2 -83.0 -82968 0.1 BCL11A POLR2A FOSL2 ZIC2 LOC105371143 RNU7-24P
GH16F024493 0.9 ENCODE 0.1 -94.0 -93993 1.1 ARID4B BRCA1 ZSCAN9 RAD21 ZNF48 RFX5 ZNF143 FOS THAP11 ZNF654 LOC105371143 RNU7-24P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU7-24P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU7-24P Gene

Chromosome:
16
Start:
24,400,056 bp from pter
End:
24,400,117 bp from pter
Size:
62 bases
Orientation:
Minus strand

Genomic View for RNU7-24P Gene

Genes around RNU7-24P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-24P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-24P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-24P Gene

Proteins for RNU7-24P Gene

Post-translational modifications for RNU7-24P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-24P Gene

Domains & Families for RNU7-24P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-24P Gene

Function for RNU7-24P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-24P Gene

Localization for RNU7-24P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU7-24P Gene

Pathways & Interactions for RNU7-24P Gene

SuperPathways for RNU7-24P Gene

No Data Available

Interacting Proteins for RNU7-24P Gene

Gene Ontology (GO) - Biological Process for RNU7-24P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-24P Gene

Transcripts for RNU7-24P Gene

mRNA/cDNA for RNU7-24P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-24P Gene

No ASD Table

Relevant External Links for RNU7-24P Gene

GeneLoc Exon Structure for
RNU7-24P
ECgene alternative splicing isoforms for
RNU7-24P

Expression for RNU7-24P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU7-24P Gene

Orthologs for RNU7-24P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU7-24P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm25150 35
  • 72 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U7 35
  • 65 (a)
ManyToMany
chicken
(Gallus gallus)
Aves U7 35
  • 64 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U7 35
  • 68 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U7 35
  • 75 (a)
OneToMany
Species where no ortholog for RNU7-24P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU7-24P Gene

ENSEMBL:
Gene Tree for RNU7-24P (if available)
TreeFam:
Gene Tree for RNU7-24P (if available)

Paralogs for RNU7-24P Gene

No data available for Paralogs for RNU7-24P Gene

Variants for RNU7-24P Gene

Relevant External Links for RNU7-24P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-24P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-24P Gene

Disorders for RNU7-24P Gene

Relevant External Links for RNU7-24P

Genetic Association Database (GAD)
RNU7-24P

No disorders were found for RNU7-24P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNU7-24P Gene

Publications for RNU7-24P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M. … Stadler P.F. (Genomics Proteomics Bioinformatics 2007) 2 3 64
  2. Structures of four human pseudogenes for U7 small nuclear RNA. (PMID: 2249787) Soldati D. … SchA1mperli D. (Gene 1990) 2 3 64
  3. Voxelwise genome-wide association study (vGWAS). (PMID: 20171287) Stein J.L. … Thompson P. (Neuroimage 2010) 46 64
  4. Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. (PMID: 10493829) Loftus B.J. … Adams M.D. (Genomics 1999) 3 64

Products for RNU7-24P Gene

Sources for RNU7-24P Gene

Content
Loading form....