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Aliases for RNU7-17P Gene

Subcategory (RNA class) for RNU7-17P Gene


Aliases for RNU7-17P Gene

  • RNA, U7 Small Nuclear 17 Pseudogene 2 3
  • RNA, Small Nuclear U7.17 Pseudogene 3
  • U7.17 3

External Ids for RNU7-17P Gene

ORGUL Members for RNU7-17P Gene

Previous GeneCards Identifiers for RNU7-17P Gene

  • GC18U900360
  • GC18P019623
  • GC18P019561

Summaries for RNU7-17P Gene

GeneCards Summary for RNU7-17P Gene

RNU7-17P (RNA, U7 Small Nuclear 17 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for RNU7-17P Gene

  • U7 small nuclear RNA: Animal histone pre-mRNAs are spliced by a different mechanism than nuclear pre-mRNAs and self-splicing introns. This processing involves the U7 snRNP, which contains only one RNA species: U7. The 5' end of U7 RNA is thought to base-pair to a conserved spacer element downstream of the cleavage site in histone pre-mRNA. This family contains a number of annotated U7 pseudogenes.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNU7-17P Gene

Genomics for RNU7-17P Gene

Regulatory Elements for RNU7-17P Gene

Enhancers for RNU7-17P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18F022031 1.1 Ensembl ENCODE 0.4 -10.8 -10845 2.3 HDAC1 PKNOX1 KLF17 SIN3A FEZF1 ZNF121 ZNF366 RCOR1 FOS EGR2 GREB1L RNU7-17P LINC01900
GH18F022016 0.8 ENCODE 0.3 -23.1 -23126 6.8 SOX13 ZNF384 CEBPG ZNF48 ZNF644 RAD21 RARA ZNF7 ZKSCAN1 PRDM10 GREB1L RNU7-17P LINC01900
GH18F021995 1.2 Ensembl ENCODE 0.2 -43.9 -43895 7.8 PKNOX1 ARID4B DMAP1 THRB ZNF48 ZNF2 RAD21 RARA SCRT2 ZNF143 ESCO1 ABHD3 ENSG00000265656 LINC01900 RNU7-17P
GH18F021990 1.1 Ensembl ENCODE 0.2 -51.6 -51619 3.4 FEZF1 RCOR1 CREM EGR2 HMG20B SP5 CEBPB USF2 ZNF341 GLIS1 ABHD3 LINC01900 RNU7-17P
GH18F021980 0.9 ENCODE 0.2 -62.4 -62403 0.2 ELF3 ATF1 MLX ARID4B THRB ZNF48 RAD21 RARA YY1 SLC30A9 LINC01900 RNU7-17P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU7-17P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU7-17P Gene

22,043,357 bp from pter
22,043,418 bp from pter
62 bases
Plus strand

Genomic View for RNU7-17P Gene

Genes around RNU7-17P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-17P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-17P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-17P Gene

Proteins for RNU7-17P Gene

Post-translational modifications for RNU7-17P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-17P Gene

Domains & Families for RNU7-17P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-17P Gene

Function for RNU7-17P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-17P Gene

Localization for RNU7-17P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU7-17P Gene

Pathways & Interactions for RNU7-17P Gene

SuperPathways for RNU7-17P Gene

No Data Available

Interacting Proteins for RNU7-17P Gene

Gene Ontology (GO) - Biological Process for RNU7-17P Gene


No data available for Pathways by source and SIGNOR curated interactions for RNU7-17P Gene

Transcripts for RNU7-17P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-17P Gene

No ASD Table

Relevant External Links for RNU7-17P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for RNU7-17P Gene

Expression for RNU7-17P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU7-17P Gene

Orthologs for RNU7-17P Gene

No data available for Orthologs and Evolution for RNU7-17P Gene

Paralogs for RNU7-17P Gene

No data available for Paralogs for RNU7-17P Gene

Variants for RNU7-17P Gene

Relevant External Links for RNU7-17P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-17P Gene

Disorders for RNU7-17P Gene

Relevant External Links for RNU7-17P

Genetic Association Database (GAD)

No disorders were found for RNU7-17P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNU7-17P Gene

Publications for RNU7-17P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M. … Stadler P.F. (Genomics Proteomics Bioinformatics 2007) 2 3 64
  2. A second-generation genomewide screen for asthma-susceptibility alleles in a founder population. (PMID: 11022011) Ober C. … Cox N.J. (Am. J. Hum. Genet. 2000) 46 64

Products for RNU7-17P Gene

Sources for RNU7-17P Gene

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