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Aliases for RNU7-16P Gene

Subcategory (RNA class) for RNU7-16P Gene

snRNA

Aliases for RNU7-16P Gene

  • RNA, U7 Small Nuclear 16 Pseudogene 2 3
  • RNA, Small Nuclear U7.16 Pseudogene 3
  • U7.16 3

External Ids for RNU7-16P Gene

ORGUL Members for RNU7-16P Gene

Previous GeneCards Identifiers for RNU7-16P Gene

  • GC07U901847
  • GC07P129045

Summaries for RNU7-16P Gene

GeneCards Summary for RNU7-16P Gene

RNU7-16P (RNA, U7 Small Nuclear 16 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU7-16P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-16P Gene

Genomics for RNU7-16P Gene

GeneHancer (GH) Regulatory Elements for RNU7-16P Gene

Promoters and enhancers for RNU7-16P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I129433 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.1 +28.9 28909 1.7 SMAD1 ARID4B SIN3A DMAP1 POLR2B ZNF143 FOS KLF13 SP3 NFYC STRIP2 ENSG00000243679 ENSG00000243302 ENSG00000230715 ENSG00000242588 RPS10P15 ENSG00000229413 CDC26P1 RNU7-16P ENSG00000273270
GH07I129610 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.1 +206.3 206258 3.1 HDGF SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 NRF1 ENSG00000273329 GC07M129602 PIR51011 RNU7-16P AHCYL2 ENSG00000243230 GC07P129743 PIR62249
GH07I129438 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.9 +33.5 33527 2.1 HDGF HNRNPUL1 PKNOX1 FOXA2 ARNT ZNF766 E2F8 FOS REST ZNF592 GC07P129440 ENSG00000230715 ENSG00000243302 ENSG00000242588 ENSG00000243679 TNPO3 ENSG00000229413 RPS10P15 RNU7-16P CDC26P1
GH07I129376 Enhancer 0.8 ENCODE 12 -29.0 -28970 0.2 CTCF FOXA2 RB1 MAX PAX8 RAD21 ZNF766 FOXK2 ARID2 ZNF143 RNU7-16P AHCYL2 ENSG00000243230 GC07M129358 LOC105375500
GH07I129608 Enhancer 0.9 Ensembl ENCODE 10.1 +201.5 201501 1.3 CTCF RB1 BATF RAD21 POLR2A VEZF1 ZNF143 FOS ZNF444 IKZF2 RNU7-16P ENSG00000273329 NRF1 TMEM209 GC07M129602 PIR51011 SMKR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-16P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-16P Gene

Genomic Locations for RNU7-16P Gene
chr7:129,405,635-129,405,696
(GRCh38/hg38)
Size:
62 bases
Orientation:
Plus strand
chr7:129,045,476-129,045,537
(GRCh37/hg19)

Genomic View for RNU7-16P Gene

Genes around RNU7-16P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-16P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-16P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-16P Gene

Proteins for RNU7-16P Gene

Post-translational modifications for RNU7-16P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-16P Gene

Domains & Families for RNU7-16P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-16P Gene

Function for RNU7-16P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-16P Gene

Localization for RNU7-16P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-16P Gene

Pathways & Interactions for RNU7-16P Gene

SuperPathways for RNU7-16P Gene

No Data Available

Interacting Proteins for RNU7-16P Gene

Gene Ontology (GO) - Biological Process for RNU7-16P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-16P Gene

Drugs & Compounds for RNU7-16P Gene

No Compound Related Data Available

Transcripts for RNU7-16P Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-16P Gene

No ASD Table

Relevant External Links for RNU7-16P Gene

GeneLoc Exon Structure for
RNU7-16P
ECgene alternative splicing isoforms for
RNU7-16P

No data available for mRNA/cDNA for RNU7-16P Gene

Expression for RNU7-16P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-16P Gene

Orthologs for RNU7-16P Gene

No data available for Orthologs and Evolution for RNU7-16P Gene

Paralogs for RNU7-16P Gene

No data available for Paralogs for RNU7-16P Gene

Variants for RNU7-16P Gene

Additional Variant Information for RNU7-16P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-16P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-16P Gene

Disorders for RNU7-16P Gene

No disorders were found for RNU7-16P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-16P Gene

Publications for RNU7-16P Gene

  1. U7 snRNAs: a computational survey. (PMID: 18267300) Marz M … Stadler PF (Genomics, proteomics & bioinformatics 2007) 2 3 58

Products for RNU7-16P Gene

Sources for RNU7-16P Gene

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