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Aliases for RNU7-169P Gene

Subcategory (RNA class) for RNU7-169P Gene

snRNA

Aliases for RNU7-169P Gene

  • RNA, U7 Small Nuclear 169 Pseudogene 2 3 5

External Ids for RNU7-169P Gene

ORGUL Members for RNU7-169P Gene

Previous GeneCards Identifiers for RNU7-169P Gene

  • GC12P109064

Summaries for RNU7-169P Gene

GeneCards Summary for RNU7-169P Gene

RNU7-169P (RNA, U7 Small Nuclear 169 Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU7-169P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-169P Gene

Genomics for RNU7-169P Gene

GeneHancer (GH) Regulatory Elements for RNU7-169P Gene

Promoters and enhancers for RNU7-169P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I108670 Enhancer 0.6 Ensembl dbSUPER 550.8 +2.0 1953 0.4 ZFP69B ZNF692 GC12P108669 RNU7-169P GC12P108678 CORO1C
GH12I108626 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11 -29.6 -29584 24.2 HDGF PKNOX1 SMAD1 ARNT FEZF1 IRF4 POLR2B ZNF766 CBX5 ZNF207 SELPLG PWP1 SART3 PRDM4 UBE3B RNU4-32P CORO1C FICD LOC101929162 TMEM119
GH12I108726 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11 +62.7 62657 9.3 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC CORO1C LOC101929162 RNU4-32P RNU7-169P SSH1 SART3 SELPLG UBE3B PRDM4 ENSG00000257221
GH12I108684 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +23.2 23188 13.6 FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 LOC101929162 CORO1C SART3 PRDM4 RNU7-169P SELPLG RNU4-32P ALKBH2 UBE3B ENSG00000257221
GH12I108699 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.5 +33.3 33295 4.6 PKNOX1 SMAD1 ARNT FEZF1 ZNF766 E2F8 ZNF592 MEF2D SMARCA4 NBN CORO1C RNU7-169P ENSG00000257221 MVK GC12P108720 GC12P108678
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-169P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-169P Gene

Genomic Locations for RNU7-169P Gene
chr12:108,668,448-108,668,508
(GRCh38/hg38)
Size:
61 bases
Orientation:
Plus strand
chr12:109,062,224-109,062,284
(GRCh37/hg19)

Genomic View for RNU7-169P Gene

Genes around RNU7-169P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-169P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-169P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-169P Gene

Proteins for RNU7-169P Gene

Post-translational modifications for RNU7-169P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-169P Gene

Domains & Families for RNU7-169P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-169P Gene

Function for RNU7-169P Gene

Phenotypes From GWAS Catalog for RNU7-169P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-169P Gene

Localization for RNU7-169P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-169P Gene

Pathways & Interactions for RNU7-169P Gene

SuperPathways for RNU7-169P Gene

No Data Available

Interacting Proteins for RNU7-169P Gene

Gene Ontology (GO) - Biological Process for RNU7-169P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-169P Gene

Drugs & Compounds for RNU7-169P Gene

No Compound Related Data Available

Transcripts for RNU7-169P Gene

mRNA/cDNA for RNU7-169P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-169P Gene

No ASD Table

Relevant External Links for RNU7-169P Gene

GeneLoc Exon Structure for
RNU7-169P
ECgene alternative splicing isoforms for
RNU7-169P

Expression for RNU7-169P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-169P Gene

Orthologs for RNU7-169P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNU7-169P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 34
  • 98 (a)
OneToOne
Species where no ortholog for RNU7-169P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-169P Gene

ENSEMBL:
Gene Tree for RNU7-169P (if available)
TreeFam:
Gene Tree for RNU7-169P (if available)

Paralogs for RNU7-169P Gene

No data available for Paralogs for RNU7-169P Gene

Variants for RNU7-169P Gene

Additional Variant Information for RNU7-169P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-169P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-169P Gene

Disorders for RNU7-169P Gene

No disorders were found for RNU7-169P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-169P Gene

Publications for RNU7-169P Gene

No publications were found for RNU7-169P Gene.

Products for RNU7-169P Gene

Sources for RNU7-169P Gene

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