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Aliases for RNU7-116P Gene

Aliases for RNU7-116P Gene

  • RNA, U7 Small Nuclear 116 Pseudogene 2 3 5

External Ids for RNU7-116P Gene

Previous GeneCards Identifiers for RNU7-116P Gene

  • GC14P064204

Summaries for RNU7-116P Gene

GeneCards Summary for RNU7-116P Gene

RNU7-116P (RNA, U7 Small Nuclear 116 Pseudogene) is a Pseudogene.

Additional gene information for RNU7-116P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU7-116P Gene

Genomics for RNU7-116P Gene

GeneHancer (GH) Regulatory Elements for RNU7-116P Gene

Promoters and enhancers for RNU7-116P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I063541 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.3 -193.1 -193143 3 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZBTB7B YY1 SLC30A9 POLR2B ENSG00000261242 PPP2R5E LOC102723809 ENSG00000252800 SGPP1 RNU7-116P ZBTB1
GH14I063675 Enhancer 1.2 Ensembl ENCODE 11.4 -59.0 -58954 3.5 PKNOX1 CLOCK NEUROD1 FEZF1 ZNF2 BRCA1 ZNF213 E2F8 KLF7 FOS ENSG00000200693 ENSG00000214770 SGPP1 TEX21P RNU7-116P ZBTB25 SYNE2 ENSG00000202182 WDR89 GC14P063658
GH14I063469 Enhancer 1.1 Ensembl ENCODE 9.9 -264.7 -264677 4.1 FOXA2 ARID4B ZNF766 ATF7 FOS RUNX3 RXRA JUNB PPARG NFIL3 SGPP1 RNU7-116P ENSG00000252800 GC14P063463 GC14P063451 PPP2R5E
GH14I063435 Enhancer 1 Ensembl ENCODE 10.1 -299.3 -299310 3.6 PKNOX1 FOXA2 CLOCK NFIB FEZF1 RAD21 YY1 ZNF143 ZNF207 SMARCC2 ENSG00000252800 RNU7-116P SGPP1 PPP2R5E GC14P063451 GPHB5
GH14I063764 Enhancer 0.8 ENCODE 12.6 +27.9 27874 0.2 ELF3 FOXA2 ZSCAN9 RARA MIXL1 MIER2 PPARG KAT8 NFIL3 MIER3 RNU7-116P SGPP1 ENSG00000202182 SYNE2 ENSG00000258411 HMGN2P14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU7-116P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU7-116P Gene

Genomic Locations for RNU7-116P Gene
chr14:63,736,444-63,736,505
(GRCh38/hg38)
Size:
62 bases
Orientation:
Plus strand
chr14:64,203,162-64,203,223
(GRCh37/hg19)

Genomic View for RNU7-116P Gene

Genes around RNU7-116P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU7-116P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU7-116P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU7-116P Gene

Proteins for RNU7-116P Gene

Post-translational modifications for RNU7-116P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU7-116P Gene

Domains & Families for RNU7-116P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU7-116P Gene

Function for RNU7-116P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU7-116P Gene

Localization for RNU7-116P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU7-116P Gene

Pathways & Interactions for RNU7-116P Gene

SuperPathways for RNU7-116P Gene

No Data Available

Interacting Proteins for RNU7-116P Gene

Gene Ontology (GO) - Biological Process for RNU7-116P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU7-116P Gene

Drugs & Compounds for RNU7-116P Gene

No Compound Related Data Available

Transcripts for RNU7-116P Gene

mRNA/cDNA for RNU7-116P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU7-116P Gene

No ASD Table

Relevant External Links for RNU7-116P Gene

GeneLoc Exon Structure for
RNU7-116P
ECgene alternative splicing isoforms for
RNU7-116P

Expression for RNU7-116P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU7-116P Gene

Orthologs for RNU7-116P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU7-116P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U7 34
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U7 34
  • 81 (a)
OneToOne
Species where no ortholog for RNU7-116P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU7-116P Gene

ENSEMBL:
Gene Tree for RNU7-116P (if available)
TreeFam:
Gene Tree for RNU7-116P (if available)

Paralogs for RNU7-116P Gene

No data available for Paralogs for RNU7-116P Gene

Variants for RNU7-116P Gene

Additional Variant Information for RNU7-116P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU7-116P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU7-116P Gene

Disorders for RNU7-116P Gene

No disorders were found for RNU7-116P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU7-116P Gene

Publications for RNU7-116P Gene

No publications were found for RNU7-116P Gene.

Products for RNU7-116P Gene

Sources for RNU7-116P Gene

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