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Aliases for RNU6ATAC36P Gene

Aliases for RNU6ATAC36P Gene

  • RNA, U6atac Small Nuclear 36, Pseudogene 2 3 5

External Ids for RNU6ATAC36P Gene

Previous GeneCards Identifiers for RNU6ATAC36P Gene

  • GC05P076245

Summaries for RNU6ATAC36P Gene

GeneCards Summary for RNU6ATAC36P Gene

RNU6ATAC36P (RNA, U6atac Small Nuclear 36, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6ATAC36P Gene

Genomics for RNU6ATAC36P Gene

Regulatory Elements for RNU6ATAC36P Gene

Enhancers for RNU6ATAC36P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G076836 1.3 Ensembl ENCODE dbSUPER 11 -110.0 -110005 4.3 ZNF146 CHD7 ZIC2 HIC1 GATA3 ZNF366 ZSCAN5C FOS PRDM10 EZH2 F2RL1 F2R ENSG00000225407 CRHBP RNU6ATAC36P RN7SL208P S100Z
GH05G076830 1.2 Ensembl ENCODE dbSUPER 11 -117.4 -117441 1.5 TEAD4 RELA ZNF316 EGR1 EED NFE2 RELB IKZF2 MAFK HES1 F2RL1 ENSG00000225407 F2R RNU6ATAC36P CRHBP RN7SL208P GC05P076819 GC05P076820
GH05G076687 1.3 Ensembl ENCODE dbSUPER 9.8 -258.1 -258091 6.2 SOX13 ZNF146 JUN MAX BMI1 EBF1 GATA2 ZNF366 EED SCRT2 F2R ENSG00000225407 LOC101929109 IQGAP2 RNU6ATAC36P CRHBP F2RL1 ENSG00000277188 F2RL2
GH05G076946 1 ENCODE dbSUPER 0.7 -1.4 -1387 1.2 HDAC1 PKNOX1 ARNT TAL1 CCNT2 TCF12 FOXM1 GATA2 NCOR1 TRIM24 RNU6ATAC36P PIR54977
GH05G076951 0.4 dbSUPER 0.7 +3.1 3068 1.4 MNT CRHBP RNU6ATAC36P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6ATAC36P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU6ATAC36P Gene

Chromosome:
5
Start:
76,948,791 bp from pter
End:
76,948,870 bp from pter
Size:
80 bases
Orientation:
Plus strand

Genomic View for RNU6ATAC36P Gene

Genes around RNU6ATAC36P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6ATAC36P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6ATAC36P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6ATAC36P Gene

Proteins for RNU6ATAC36P Gene

Post-translational modifications for RNU6ATAC36P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6ATAC36P Gene

Domains & Families for RNU6ATAC36P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6ATAC36P Gene

Function for RNU6ATAC36P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6ATAC36P Gene

Localization for RNU6ATAC36P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6ATAC36P Gene

Pathways & Interactions for RNU6ATAC36P Gene

SuperPathways for RNU6ATAC36P Gene

No Data Available

Interacting Proteins for RNU6ATAC36P Gene

Gene Ontology (GO) - Biological Process for RNU6ATAC36P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6ATAC36P Gene

Drugs & Compounds for RNU6ATAC36P Gene

No Compound Related Data Available

Transcripts for RNU6ATAC36P Gene

mRNA/cDNA for RNU6ATAC36P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6ATAC36P Gene

No ASD Table

Relevant External Links for RNU6ATAC36P Gene

GeneLoc Exon Structure for
RNU6ATAC36P
ECgene alternative splicing isoforms for
RNU6ATAC36P

Expression for RNU6ATAC36P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6ATAC36P Gene

NURSA nuclear receptor signaling pathways regulating expression of RNU6ATAC36P Gene:

RNU6ATAC36P
genes like me logo Genes that share expression patterns with RNU6ATAC36P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6ATAC36P Gene

Orthologs for RNU6ATAC36P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6ATAC36P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6atac 35
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22031 35
  • 42 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U6atac 35
  • 40 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U6atac 35
  • 39 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U6atac 35
  • 34 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U6atac 35
  • 40 (a)
OneToMany
Species where no ortholog for RNU6ATAC36P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU6ATAC36P Gene

ENSEMBL:
Gene Tree for RNU6ATAC36P (if available)
TreeFam:
Gene Tree for RNU6ATAC36P (if available)

Paralogs for RNU6ATAC36P Gene

No data available for Paralogs for RNU6ATAC36P Gene

Variants for RNU6ATAC36P Gene

Relevant External Links for RNU6ATAC36P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6ATAC36P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6ATAC36P Gene

Disorders for RNU6ATAC36P Gene

No disorders were found for RNU6ATAC36P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6ATAC36P Gene

Publications for RNU6ATAC36P Gene

No publications were found for RNU6ATAC36P Gene.

Products for RNU6ATAC36P Gene

Sources for RNU6ATAC36P Gene

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