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Aliases for RNU6-81P Gene

Subcategory (RNA class) for RNU6-81P Gene

snRNA

Aliases for RNU6-81P Gene

  • RNA, U6 Small Nuclear 81, Pseudogene 2 3 5
  • RNA, U6 Small Nuclear 81 2
  • RNU6-81 3

External Ids for RNU6-81P Gene

ORGUL Members for RNU6-81P Gene

Previous HGNC Symbols for RNU6-81P Gene

  • RNU6-81

Previous GeneCards Identifiers for RNU6-81P Gene

  • GC13P064360

Summaries for RNU6-81P Gene

GeneCards Summary for RNU6-81P Gene

RNU6-81P (RNA, U6 Small Nuclear 81, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-81P Gene

Genomics for RNU6-81P Gene

Genomic Location for RNU6-81P Gene

Chromosome:
13
Start:
63,783,801 bp from pter
End:
63,783,904 bp from pter
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU6-81P Gene

Genes around RNU6-81P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-81P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-81P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-81P Gene

No data available for Regulatory Elements for RNU6-81P Gene

Proteins for RNU6-81P Gene

Post-translational modifications for RNU6-81P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-81P Gene

Domains & Families for RNU6-81P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-81P Gene

Function for RNU6-81P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-81P Gene

Localization for RNU6-81P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-81P Gene

Pathways & Interactions for RNU6-81P Gene

SuperPathways for RNU6-81P Gene

No Data Available

Interacting Proteins for RNU6-81P Gene

Gene Ontology (GO) - Biological Process for RNU6-81P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-81P Gene

Drugs & Compounds for RNU6-81P Gene

No Compound Related Data Available

Transcripts for RNU6-81P Gene

mRNA/cDNA for RNU6-81P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-81P Gene

No ASD Table

Relevant External Links for RNU6-81P Gene

GeneLoc Exon Structure for
RNU6-81P
ECgene alternative splicing isoforms for
RNU6-81P

Expression for RNU6-81P Gene

mRNA expression in normal human tissues for RNU6-81P Gene

genes like me logo Genes that share expression patterns with RNU6-81P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU6-81P Gene

Orthologs for RNU6-81P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-81P Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia U6 35
  • 73 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia U6 35
  • 100 (a)
OneToOne
Species where no ortholog for RNU6-81P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-81P Gene

ENSEMBL:
Gene Tree for RNU6-81P (if available)
TreeFam:
Gene Tree for RNU6-81P (if available)

Paralogs for RNU6-81P Gene

No data available for Paralogs for RNU6-81P Gene

Variants for RNU6-81P Gene

Sequence variations from dbSNP and Humsavar for RNU6-81P Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs2807078 -- 63,782,956(+) TTCTA(A/G)ACATT upstream-variant-2KB
rs7985606 -- 63,782,163(+) gcagt(C/T)tggct upstream-variant-2KB
rs7998701 -- 63,783,705(+) GGAAA(C/T)TTGCT upstream-variant-2KB
rs9539862 -- 63,782,017(+) ttaag(A/T)ctgct upstream-variant-2KB
rs9539863 -- 63,782,068(+) tccca(C/G/T)gaaga upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RNU6-81P Gene

Variant ID Type Subtype PubMed ID
dgv1686n100 CNV loss 25217958
dgv1687n100 CNV loss 25217958
dgv1688n100 CNV gain 25217958
dgv1689n100 CNV gain+loss 25217958
dgv1690n100 CNV gain 25217958
dgv1691n100 CNV gain 25217958
dgv1692n100 CNV gain 25217958
dgv1693n100 CNV gain 25217958
dgv1694n100 CNV gain 25217958
dgv1695n100 CNV gain 25217958
dgv1696n100 CNV gain 25217958
dgv3192n54 CNV gain 21841781
dgv3202n54 CNV loss 21841781
dgv549e212 CNV loss 25503493
dgv550e212 CNV gain 25503493
dgv551e212 CNV gain 25503493
dgv552e212 CNV gain 25503493
dgv84n111 CNV duplication 26073780
esv2759941 CNV loss 17122850
esv2760302 CNV loss 21179565
esv2761233 CNV gain+loss 21179565
esv3580702 CNV loss 25503493
esv3582449 CNV gain 25503493
esv3582472 CNV gain 25503493
esv3632408 CNV loss 21293372
esv3632416 CNV loss 21293372
esv3632425 CNV loss 21293372
esv3632426 CNV gain 21293372
esv3892367 CNV gain 25118596
esv3892369 CNV loss 25118596
nsv1042265 CNV loss 25217958
nsv1050067 CNV gain 25217958
nsv1052299 CNV gain 25217958
nsv1054006 CNV gain 25217958
nsv1160130 CNV duplication 26073780
nsv442313 CNV gain+loss 18776908
nsv561960 CNV gain 21841781
nsv561961 CNV gain 21841781
nsv561963 CNV gain 21841781
nsv7244 OTHER inversion 18451855

Relevant External Links for RNU6-81P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-81P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RNU6-81P Gene

Disorders for RNU6-81P Gene

Relevant External Links for RNU6-81P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RNU6-81P

No disorders were found for RNU6-81P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNU6-81P Gene

Publications for RNU6-81P Gene

No publications were found for RNU6-81P Gene.

Products for RNU6-81P Gene

Sources for RNU6-81P Gene

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