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Aliases for RNU6-782P Gene

Aliases for RNU6-782P Gene

  • RNA, U6 Small Nuclear 782, Pseudogene 2 3 5

External Ids for RNU6-782P Gene

Previous GeneCards Identifiers for RNU6-782P Gene

  • GC19P015258
  • GC00U935608

Summaries for RNU6-782P Gene

GeneCards Summary for RNU6-782P Gene

RNU6-782P (RNA, U6 Small Nuclear 782, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-782P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-782P Gene

Genomics for RNU6-782P Gene

Regulatory Elements for RNU6-782P Gene

Enhancers for RNU6-782P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H015222 1.8 FANTOM5 Ensembl ENCODE dbSUPER 11.3 +78.5 78498 2 PKNOX1 ARID4B SIN3A ZNF2 ZBTB7B ZNF121 GLIS2 ZNF143 SP3 NFYC NOTCH3 RNU6-782P BRD4 OR10H5 ENSG00000273218 WIZ SYDE1 SLC1A6 ENSG00000269635 EPHX3
GH19H015194 1.5 Ensembl ENCODE dbSUPER 11.6 +52.9 52881 6 HDGF PKNOX1 ZNF133 SIN3A ZNF2 ZBTB7B GLIS2 FOS KLF7 SP3 AKAP8 BRD4 EPHX3 RNU6-782P ZNF333 TPM4 NOTCH3 MIR6795
GH19H015295 1.6 Ensembl ENCODE dbSUPER 10.3 +153.5 153505 5 FOXA2 MLX ARNT ARID4B FEZF1 ZNF2 SLC30A9 ZNF766 SP5 ZHX2 AKAP8 ZNF333 BRD4 EPHX3 NOTCH3 RASAL3 ENSG00000268189 SNRPGP15 RNU6-782P CYP4F24P
GH19H015245 1.4 Ensembl ENCODE dbSUPER 10.9 +104.9 104944 8 PKNOX1 ZFP64 ARID4B KLF17 RAD21 SCRT2 FOS EGR2 SMARCC1 ZNF680 AKAP8L AKAP8 RNU6-782P OR7C1 GC19P015251 PIR55370 GC19M015250
GH19H015279 1.5 Ensembl ENCODE dbSUPER 10.1 +137.1 137145 6 PKNOX1 ATF1 FOXA2 YY1 ZNF121 FOS ATF7 REST NFIL3 SSRP1 AKAP8 DDX39A BRD4 EPHX3 AKAP8L RNU6-782P GC19P015285 GC19M015286
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6-782P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU6-782P Gene

Chromosome:
19
Start:
15,145,215 bp from pter
End:
15,145,318 bp from pter
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU6-782P Gene

Genes around RNU6-782P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-782P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-782P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-782P Gene

Proteins for RNU6-782P Gene

Post-translational modifications for RNU6-782P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-782P Gene

Domains & Families for RNU6-782P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-782P Gene

Function for RNU6-782P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-782P Gene

Localization for RNU6-782P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-782P Gene

Pathways & Interactions for RNU6-782P Gene

SuperPathways for RNU6-782P Gene

No Data Available

Interacting Proteins for RNU6-782P Gene

Gene Ontology (GO) - Biological Process for RNU6-782P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-782P Gene

Drugs & Compounds for RNU6-782P Gene

No Compound Related Data Available

Transcripts for RNU6-782P Gene

mRNA/cDNA for RNU6-782P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-782P Gene

No ASD Table

Relevant External Links for RNU6-782P Gene

GeneLoc Exon Structure for
RNU6-782P
ECgene alternative splicing isoforms for
RNU6-782P

Expression for RNU6-782P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-782P Gene

genes like me logo Genes that share expression patterns with RNU6-782P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-782P Gene

Orthologs for RNU6-782P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-782P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 34
  • 76 (a)
OneToMany
dog
(Canis familiaris)
Mammalia U6 34
  • 75 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U6 34
  • 68 (a)
ManyToMany
Species where no ortholog for RNU6-782P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-782P Gene

ENSEMBL:
Gene Tree for RNU6-782P (if available)
TreeFam:
Gene Tree for RNU6-782P (if available)

Paralogs for RNU6-782P Gene

No data available for Paralogs for RNU6-782P Gene

Variants for RNU6-782P Gene

Relevant External Links for RNU6-782P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-782P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-782P Gene

Disorders for RNU6-782P Gene

No disorders were found for RNU6-782P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-782P Gene

Publications for RNU6-782P Gene

No publications were found for RNU6-782P Gene.

Products for RNU6-782P Gene

Sources for RNU6-782P Gene

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