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Aliases for RNU6-769P Gene

Subcategory (RNA class) for RNU6-769P Gene

snRNA

Aliases for RNU6-769P Gene

  • RNA, U6 Small Nuclear 769, Pseudogene 2 3 5

External Ids for RNU6-769P Gene

ORGUL Members for RNU6-769P Gene

Previous GeneCards Identifiers for RNU6-769P Gene

  • GC12P051029
  • GC00U934782

Summaries for RNU6-769P Gene

GeneCards Summary for RNU6-769P Gene

RNU6-769P (RNA, U6 Small Nuclear 769, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-769P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-769P Gene

Genomics for RNU6-769P Gene

GeneHancer (GH) Regulatory Elements for RNU6-769P Gene

Promoters and enhancers for RNU6-769P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I050633 Enhancer 0.3 dbSUPER 550.8 +1.5 1547 2.2 HLF GC12P050634 RNU6-769P LIMA1 DIP2B GC12P050657
GH12I050504 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.9 -126.2 -126162 6.2 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A IRF4 YY1 CBX5 DIP2B LIMA1 ATF1 CERS5 ENSG00000257298 SMARCD1 RNU6-769P BCDIN3D ENSG00000257964 AQP6
GH12I050762 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.8 +131.5 131524 5.6 HDGF PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 YY1 ATF1 HNRNPA3P10 SLC11A2 SMARCD1 BCDIN3D LIMA1 RNU6-1273P RNU6-769P FAM186A LARP4
GH12I050513 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12 -115.8 -115844 8.7 PKNOX1 FOXA2 SMAD1 RB1 YY1 ZNF121 ATF7 ETV6 IKZF2 ZNF202 LIMA1 SMARCD1 BCDIN3D SLC11A2 CERS5 RNU6-769P ATF1 AQP5 AQP6 DIP2B
GH12I050536 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -95.2 -95181 2.6 PKNOX1 FOXA2 SIN3A EGR1 SCRT2 FOS EGR2 IKZF1 CEBPA ZNF24 ATF1 CERS5 RNU6-769P DIP2B LIMA1 SLC11A2 GC12P050634
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-769P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-769P Gene

Genomic Locations for RNU6-769P Gene
chr12:50,633,273-50,633,376
(GRCh38/hg38)
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU6-769P Gene

Genes around RNU6-769P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-769P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-769P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-769P Gene

Proteins for RNU6-769P Gene

Post-translational modifications for RNU6-769P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-769P Gene

Domains & Families for RNU6-769P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-769P Gene

Function for RNU6-769P Gene

Phenotypes From GWAS Catalog for RNU6-769P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-769P Gene

Localization for RNU6-769P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-769P Gene

Pathways & Interactions for RNU6-769P Gene

SuperPathways for RNU6-769P Gene

No Data Available

Interacting Proteins for RNU6-769P Gene

Gene Ontology (GO) - Biological Process for RNU6-769P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-769P Gene

Drugs & Compounds for RNU6-769P Gene

No Compound Related Data Available

Transcripts for RNU6-769P Gene

mRNA/cDNA for RNU6-769P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-769P Gene

No ASD Table

Relevant External Links for RNU6-769P Gene

GeneLoc Exon Structure for
RNU6-769P
ECgene alternative splicing isoforms for
RNU6-769P

Expression for RNU6-769P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-769P Gene

genes like me logo Genes that share expression patterns with RNU6-769P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-769P Gene

Orthologs for RNU6-769P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-769P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 34
  • 88 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U6 34
  • 86 (a)
OneToMany
cow
(Bos Taurus)
Mammalia U6 34 34 34
  • 83 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22083 34
  • 66 (a)
ManyToMany
Species where no ortholog for RNU6-769P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-769P Gene

ENSEMBL:
Gene Tree for RNU6-769P (if available)
TreeFam:
Gene Tree for RNU6-769P (if available)

Paralogs for RNU6-769P Gene

No data available for Paralogs for RNU6-769P Gene

Variants for RNU6-769P Gene

Additional Variant Information for RNU6-769P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-769P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-769P Gene

Disorders for RNU6-769P Gene

No disorders were found for RNU6-769P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-769P Gene

Publications for RNU6-769P Gene

No publications were found for RNU6-769P Gene.

Products for RNU6-769P Gene

Sources for RNU6-769P Gene

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