Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU6-722P Gene

Aliases for RNU6-722P Gene

  • RNA, U6 Small Nuclear 722, Pseudogene 2 3 5

External Ids for RNU6-722P Gene

Previous GeneCards Identifiers for RNU6-722P Gene

  • GC0XM048820
  • GC00U935902

Summaries for RNU6-722P Gene

GeneCards Summary for RNU6-722P Gene

RNU6-722P (RNA, U6 Small Nuclear 722, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-722P Gene

Genomics for RNU6-722P Gene

Regulatory Elements for RNU6-722P Gene

Enhancers for RNU6-722P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF049037 1.1 ENCODE 12.4 -81.9 -81850 7.0 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 GAGE12J GAGE12C GAGE12G GAGE12H GAGE2A SSXP9 PAGE1 ENSG00000270747 SSX9 PRAF2
GH0XF048954 1.3 Ensembl ENCODE 0.8 +0.5 514 8.1 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF143 GPKOW PIM2 SLC35A2 ENSG00000204620 WAS PCSK1N ENSG00000228343 KCND1 GRIPAP1 RNU6-722P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6-722P on UCSC Golden Path with GeneCards custom track

Promoters for RNU6-722P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000478419 1482 3601 HDGF PKNOX1 ATF1 CREB3L1 ZFP64 SIN3A ARID4B FEZF1 DMAP1 BRCA1

Genomic Location for RNU6-722P Gene

Chromosome:
X
Start:
48,959,179 bp from pter
End:
48,959,282 bp from pter
Size:
104 bases
Orientation:
Minus strand

Genomic View for RNU6-722P Gene

Genes around RNU6-722P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-722P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-722P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-722P Gene

Proteins for RNU6-722P Gene

Post-translational modifications for RNU6-722P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-722P Gene

Domains & Families for RNU6-722P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-722P Gene

Function for RNU6-722P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-722P Gene

Localization for RNU6-722P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-722P Gene

Pathways & Interactions for RNU6-722P Gene

SuperPathways for RNU6-722P Gene

No Data Available

Interacting Proteins for RNU6-722P Gene

Gene Ontology (GO) - Biological Process for RNU6-722P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-722P Gene

Transcripts for RNU6-722P Gene

mRNA/cDNA for RNU6-722P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-722P Gene

No ASD Table

Relevant External Links for RNU6-722P Gene

GeneLoc Exon Structure for
RNU6-722P
ECgene alternative splicing isoforms for
RNU6-722P

Expression for RNU6-722P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU6-722P Gene

genes like me logo Genes that share expression patterns with RNU6-722P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU6-722P Gene

Orthologs for RNU6-722P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-722P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 35
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 35
  • 88 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm24018 35
  • 88 (a)
ManyToMany
Species where no ortholog for RNU6-722P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-722P Gene

ENSEMBL:
Gene Tree for RNU6-722P (if available)
TreeFam:
Gene Tree for RNU6-722P (if available)

Paralogs for RNU6-722P Gene

No data available for Paralogs for RNU6-722P Gene

Variants for RNU6-722P Gene

Relevant External Links for RNU6-722P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-722P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-722P Gene

Disorders for RNU6-722P Gene

No disorders were found for RNU6-722P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-722P Gene

Publications for RNU6-722P Gene

No publications were found for RNU6-722P Gene.

Products for RNU6-722P Gene

Sources for RNU6-722P Gene

Content
Loading form....