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Aliases for RNU6-7 Gene

Subcategory (RNA class) for RNU6-7 Gene

snRNA

Quality Score for this RNA gene is

3

Aliases for RNU6-7 Gene

  • RNA, U6 Small Nuclear 7 2 3
  • U6-7 3

External Ids for RNU6-7 Gene

ORGUL Members for RNU6-7 Gene

Previous GeneCards Identifiers for RNU6-7 Gene

  • GC00U922728
  • GC03P194936
  • GC14P032673

Summaries for RNU6-7 Gene

GeneCards Summary for RNU6-7 Gene

RNU6-7 (RNA, U6 Small Nuclear 7) is an RNA Gene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-7 Gene

Genomics for RNU6-7 Gene

Genomic Location for RNU6-7 Gene

Start:
32,202,045 bp from pter
End:
32,202,151 bp from pter
Size:
107 bases
Orientation:
Plus strand

Genomic View for RNU6-7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNU6-7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-7 Gene

No data available for Regulatory Elements for RNU6-7 Gene

Proteins for RNU6-7 Gene

Post-translational modifications for RNU6-7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-7 Gene

Domains for RNU6-7 Gene

Gene Families for RNU6-7 Gene

HGNC:
  • snRNA :ncRNAs / Small nuclear RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNU6-7: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-7 Gene

Function for RNU6-7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNU6-7 Gene

Localization for RNU6-7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-7 Gene

Pathways for RNU6-7 Gene

SuperPathways for RNU6-7 Gene

No Data Available

Interacting Proteins for RNU6-7 Gene

Gene Ontology (GO) - Biological Process for RNU6-7 Gene

None

No data available for Pathways by source for RNU6-7 Gene

Transcripts for RNU6-7 Gene

mRNA/cDNA for RNU6-7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-7 Gene

No ASD Table

Relevant External Links for RNU6-7 Gene

GeneLoc Exon Structure for
RNU6-7
ECgene alternative splicing isoforms for
RNU6-7

Expression for RNU6-7 Gene

mRNA expression in normal human tissues for RNU6-7 Gene

genes like me logo Genes that share expressions with RNU6-7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RNU6-7 Gene

Orthologs for RNU6-7 Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 36
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm24859 36
  • 100 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 36
  • 100 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii U6 36
  • 96 (a)
OneToMany
Species with no ortholog for RNU6-7:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU6-7 Gene

ENSEMBL:
Gene Tree for RNU6-7 (if available)
TreeFam:
Gene Tree for RNU6-7 (if available)

Paralogs for RNU6-7 Gene

No data available for Paralogs for RNU6-7 Gene

Variants for RNU6-7 Gene

Sequence variations from dbSNP and Humsavar for RNU6-7 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs1952485 -- 32,201,359(-) GGGGG(A/C)TGAGG upstream-variant-2KB
rs1952486 -- 32,201,338(-) GGGCG(C/G)CCACA upstream-variant-2KB
rs1958365 -- 32,202,035(-) ATAAG(C/T)CCGTC upstream-variant-2KB
rs1958366 -- 32,201,900(-) GTAAG(A/T)TTGGT upstream-variant-2KB
rs1958367 -- 32,201,874(-) CCGTA(C/T)CTGGC upstream-variant-2KB

Relevant External Links for RNU6-7 Gene

HapMap Linkage Disequilibrium report
RNU6-7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for RNU6-7 Gene

Disorders for RNU6-7 Gene

No disorders were found for RNU6-7 Gene.

No data available for UniProtKB/Swiss-Prot for RNU6-7 Gene

Publications for RNU6-7 Gene

  1. Multiple, dispersed human U6 small nuclear RNA genes with varied transcriptional efficiencies. (PMID: 12711679) Domitrovich A.M. … Kunkel G.R. (Nucleic Acids Res. 2003) 2 3

Products for RNU6-7 Gene

Sources for RNU6-7 Gene

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