Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU6-6P Gene

Subcategory (RNA class) for RNU6-6P Gene


Aliases for RNU6-6P Gene

  • RNA, U6 Small Nuclear 6, Pseudogene 2 3 5
  • RNA, U6B Small Nuclear 2 3
  • RNA, U6 Small Nuclear 6 2
  • RNU6-6 3
  • RNU6B 3
  • U6-6 3

External Ids for RNU6-6P Gene

ORGUL Members for RNU6-6P Gene

Previous HGNC Symbols for RNU6-6P Gene

  • RNU6B
  • RNU6-6

Summaries for RNU6-6P Gene

GeneCards Summary for RNU6-6P Gene

RNU6-6P (RNA, U6 Small Nuclear 6, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-6P Gene

Genomics for RNU6-6P Gene

Regulatory Elements for RNU6-6P Gene

Enhancers for RNU6-6P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G013219 0.8 ENCODE 0.7 +2.9 2852 0.3 HDAC1 CTCF RB1 SAP130 TEAD4 MAX ARID4B RAD21 TEAD3 SMC3 PHYH RNU6-6P UCMA
GH10G013220 0.2 ENCODE 0.7 +3.2 3227 0.2 RNU6-6P UCMA
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6-6P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU6-6P Gene

13,217,269 bp from pter
13,217,375 bp from pter
107 bases
Plus strand

Genomic View for RNU6-6P Gene

Genes around RNU6-6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-6P Gene

Proteins for RNU6-6P Gene

Post-translational modifications for RNU6-6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-6P Gene

Domains & Families for RNU6-6P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-6P Gene

Function for RNU6-6P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-6P Gene

Localization for RNU6-6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-6P Gene

Pathways & Interactions for RNU6-6P Gene

SuperPathways for RNU6-6P Gene

No Data Available

Interacting Proteins for RNU6-6P Gene

Gene Ontology (GO) - Biological Process for RNU6-6P Gene


No data available for Pathways by source and SIGNOR curated interactions for RNU6-6P Gene

Drugs & Compounds for RNU6-6P Gene

No Compound Related Data Available

Transcripts for RNU6-6P Gene

mRNA/cDNA for RNU6-6P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-6P Gene

No ASD Table

Relevant External Links for RNU6-6P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNU6-6P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-6P Gene

genes like me logo Genes that share expression patterns with RNU6-6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-6P Gene

Orthologs for RNU6-6P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-6P Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia U6 35
  • 100 (a)
(Canis familiaris)
Mammalia U6 35
  • 100 (a)
(Mus musculus)
Mammalia Gm22295 35
  • 100 (a)
Gm26317 35
  • 100 (a)
(Ornithorhynchus anatinus)
Mammalia U6 35
  • 100 (a)
Species where no ortholog for RNU6-6P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-6P Gene

Gene Tree for RNU6-6P (if available)
Gene Tree for RNU6-6P (if available)

Paralogs for RNU6-6P Gene

No data available for Paralogs for RNU6-6P Gene

Variants for RNU6-6P Gene

Relevant External Links for RNU6-6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-6P Gene

Disorders for RNU6-6P Gene

No disorders were found for RNU6-6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-6P Gene

Publications for RNU6-6P Gene

  1. Multiple, dispersed human U6 small nuclear RNA genes with varied transcriptional efficiencies. (PMID: 12711679) Domitrovich A.M. … Kunkel G.R. (Nucleic Acids Res. 2003) 2 3 64
  2. Identification of suitable reference genes for hepatic microRNA quantitation. (PMID: 24606728) Lamba V. … Lamba J.K. (BMC Res Notes 2014) 3 64
  3. Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. (PMID: 23319000) Luykx J.J. … Ophoff R.A. (Mol. Psychiatry 2013) 3 64
  4. Cwc2 and its human homologue RBM22 promote an active conformation of the spliceosome catalytic centre. (PMID: 22246180) Rasche N. … Luhrmann R. (EMBO J. 2012) 3 64
  5. Common genetic variation and performance on standardized cognitive tests. (PMID: 20125193) Cirulli E.T. … Goldstein D.B. (Eur. J. Hum. Genet. 2010) 3 64

Products for RNU6-6P Gene

Sources for RNU6-6P Gene

Loading form....