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Aliases for RNU6-618P Gene

Subcategory (RNA class) for RNU6-618P Gene

snRNA

Aliases for RNU6-618P Gene

  • RNA, U6 Small Nuclear 618, Pseudogene 2 3 5

External Ids for RNU6-618P Gene

ORGUL Members for RNU6-618P Gene

Previous GeneCards Identifiers for RNU6-618P Gene

  • GC12P031551
  • GC00U934675

Summaries for RNU6-618P Gene

GeneCards Summary for RNU6-618P Gene

RNU6-618P (RNA, U6 Small Nuclear 618, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-618P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-618P Gene

Genomics for RNU6-618P Gene

GeneHancer (GH) Regulatory Elements for RNU6-618P Gene

Promoters and enhancers for RNU6-618P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I031361 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.8 -33.4 -33352 2.4 HDGF PKNOX1 ATF1 FOXA2 ZSCAN4 ARID4B KLF17 RAD21 ZNF48 ZNF335 SINHCAF RNU6-618P FLJ13224 AK4P3 DDX11 DENND5B ENSG00000283256 LINC02387 GC12P031343
GH12I031516 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.8 +122.9 122932 4.6 FOXA2 ZNF133 SIN3A FEZF1 ZNF2 BRCA1 ZNF121 FOS REST TSHZ1 DENND5B DENND5B-AS1 RNU5F-4P RNU6-618P ETFBKMT AK4P3 GC12M031506 ENSG00000201228 ENSG00000225349
GH12I031636 Enhancer 1.1 Ensembl ENCODE 12.1 +240.3 240322 1.1 HDGF ATF1 SMAD1 ZNF133 YBX1 ZNF2 IRF4 NCOA2 TCF12 ZNF213 DDX11-AS1 IPO8 RNU6-618P RNU5F-4P DENND5B-AS1 DENND5B SINHCAF FLJ13224 CAPRIN2 GC12P031641
GH12I031524 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.9 +129.2 129182 2.3 FOXA2 SIN3A BATF IRF4 RARA RFX5 ATF7 RUNX3 CBFB JUNB DENND5B-AS1 DENND5B RNU5F-4P RNU6-618P ETFBKMT AK4P3 ENSG00000225349 ENSG00000201228 GC12M031506
GH12I031360 Enhancer 0.8 dbSUPER 11.8 -35.6 -35634 0.6 ZNF529 ZFP64 MZF1 FEZF1 ZNF213 ZNF354C KLF7 ZNF202 ZNF680 ZNF654 IPO8 DDX11 DDX11-AS1 SINHCAF BICD1 CAPRIN2 FLJ13224 ENSG00000256984 RNU6-618P DENND5B-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-618P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-618P Gene

Genomic Locations for RNU6-618P Gene
chr12:31,396,390-31,396,501
(GRCh38/hg38)
Size:
112 bases
Orientation:
Plus strand

Genomic View for RNU6-618P Gene

Genes around RNU6-618P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-618P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-618P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-618P Gene

Proteins for RNU6-618P Gene

Post-translational modifications for RNU6-618P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-618P Gene

Domains & Families for RNU6-618P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-618P Gene

Function for RNU6-618P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-618P Gene

Localization for RNU6-618P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-618P Gene

Pathways & Interactions for RNU6-618P Gene

SuperPathways for RNU6-618P Gene

No Data Available

Interacting Proteins for RNU6-618P Gene

Gene Ontology (GO) - Biological Process for RNU6-618P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-618P Gene

Drugs & Compounds for RNU6-618P Gene

No Compound Related Data Available

Transcripts for RNU6-618P Gene

mRNA/cDNA for RNU6-618P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-618P Gene

No ASD Table

Relevant External Links for RNU6-618P Gene

GeneLoc Exon Structure for
RNU6-618P
ECgene alternative splicing isoforms for
RNU6-618P

Expression for RNU6-618P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-618P Gene

genes like me logo Genes that share expression patterns with RNU6-618P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-618P Gene

Orthologs for RNU6-618P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-618P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 97 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 34
  • 86 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U6 34
  • 84 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22090 34
  • 67 (a)
ManyToMany
Species where no ortholog for RNU6-618P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-618P Gene

ENSEMBL:
Gene Tree for RNU6-618P (if available)
TreeFam:
Gene Tree for RNU6-618P (if available)

Paralogs for RNU6-618P Gene

No data available for Paralogs for RNU6-618P Gene

Variants for RNU6-618P Gene

Additional Variant Information for RNU6-618P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-618P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-618P Gene

Disorders for RNU6-618P Gene

No disorders were found for RNU6-618P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-618P Gene

Publications for RNU6-618P Gene

No publications were found for RNU6-618P Gene.

Products for RNU6-618P Gene

Sources for RNU6-618P Gene

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