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Aliases for RNU6-604P Gene

Subcategory (RNA class) for RNU6-604P Gene

snRNA

Aliases for RNU6-604P Gene

  • RNA, U6 Small Nuclear 604, Pseudogene 2 3 5

External Ids for RNU6-604P Gene

ORGUL Members for RNU6-604P Gene

Previous GeneCards Identifiers for RNU6-604P Gene

  • GC07P151598
  • GC00U935063

Summaries for RNU6-604P Gene

GeneCards Summary for RNU6-604P Gene

RNU6-604P (RNA, U6 Small Nuclear 604, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-604P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-604P Gene

Genomics for RNU6-604P Gene

GeneHancer (GH) Regulatory Elements for RNU6-604P Gene

Promoters and enhancers for RNU6-604P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I151899 Enhancer 0.5 ENCODE 550.8 -0.1 -123 0.6 SCRT1 SCRT2 ZNF266 ZNF24 FOS ZKSCAN1 GC07P151901 RNU6-604P NUB1 ENSG00000244151 CHPF2 KMT2C GC07P151896 GC07P151897
GH07I151931 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.7 +32.4 32358 1.7 PKNOX1 SIN3A BMI1 RAD21 RFX5 ZNF155 ZNF335 ZNF366 RCOR1 ZNF654 PRKAG2 NUB1 GALNTL5 LOC105375570 RNU6-604P LOC644090 ENSG00000244151 KMT2C RHEB ENSG00000222941
GH07I151843 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -55.7 -55707 1.4 ELF3 FOXA2 ARID4B SIN3A FOS CREM THAP11 EGR2 SMARCA5 USF2 PRKAG2 PRKAG2-AS1 LOC644090 GALNTL5 LOC105375570 RNU6-604P WDR86 RHEB GC07M151865 GC07M151797
GH07I151782 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10.6 -117.2 -117208 1 PKNOX1 ATF1 ZNF2 ZBTB7B ZNF48 GLIS2 CBX5 ZNF213 E2F8 ZNF143 PRKAG2 GALNTL5 LOC644090 RNU6-604P LOC105375570 GC07M151742
GH07I151837 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -61.4 -61429 3.1 RFX1 ZBTB6 ZNF449 MAX REST ZFHX2 POLR2A GLIS1 PRDM10 MYC PRKAG2 PRKAG2-AS1 LOC644090 GALNTL5 LOC105375570 RNU6-604P GC07M151797 GC07M151865
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-604P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-604P Gene

Genomic Locations for RNU6-604P Gene
chr7:151,900,275-151,900,374
(GRCh38/hg38)
Size:
100 bases
Orientation:
Plus strand

Genomic View for RNU6-604P Gene

Genes around RNU6-604P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-604P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-604P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-604P Gene

Proteins for RNU6-604P Gene

Post-translational modifications for RNU6-604P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-604P Gene

Domains & Families for RNU6-604P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-604P Gene

Function for RNU6-604P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-604P Gene

Localization for RNU6-604P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-604P Gene

Pathways & Interactions for RNU6-604P Gene

SuperPathways for RNU6-604P Gene

No Data Available

Interacting Proteins for RNU6-604P Gene

Gene Ontology (GO) - Biological Process for RNU6-604P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-604P Gene

Drugs & Compounds for RNU6-604P Gene

No Compound Related Data Available

Transcripts for RNU6-604P Gene

mRNA/cDNA for RNU6-604P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-604P Gene

No ASD Table

Relevant External Links for RNU6-604P Gene

GeneLoc Exon Structure for
RNU6-604P
ECgene alternative splicing isoforms for
RNU6-604P

Expression for RNU6-604P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-604P Gene

genes like me logo Genes that share expression patterns with RNU6-604P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-604P Gene

Orthologs for RNU6-604P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-604P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 34
  • 62 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U6 34
  • 60 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U6 34
  • 60 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm24965 34
  • 58 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U6 34
  • 52 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U6 34
  • 68 (a)
ManyToMany
Species where no ortholog for RNU6-604P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU6-604P Gene

ENSEMBL:
Gene Tree for RNU6-604P (if available)
TreeFam:
Gene Tree for RNU6-604P (if available)

Paralogs for RNU6-604P Gene

No data available for Paralogs for RNU6-604P Gene

Variants for RNU6-604P Gene

Additional Variant Information for RNU6-604P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-604P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-604P Gene

Disorders for RNU6-604P Gene

No disorders were found for RNU6-604P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-604P Gene

Publications for RNU6-604P Gene

No publications were found for RNU6-604P Gene.

Products for RNU6-604P Gene

Sources for RNU6-604P Gene

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