Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU6-586P Gene

Aliases for RNU6-586P Gene

  • RNA, U6 Small Nuclear 586, Pseudogene 2 3 5

External Ids for RNU6-586P Gene

Previous GeneCards Identifiers for RNU6-586P Gene

  • GC01P067670
  • GC00U935973

Summaries for RNU6-586P Gene

GeneCards Summary for RNU6-586P Gene

RNU6-586P (RNA, U6 Small Nuclear 586, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-586P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-586P Gene

Genomics for RNU6-586P Gene

GeneHancer (GH) Regulatory Elements for RNU6-586P Gene

Promoters and enhancers for RNU6-586P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I067194 Enhancer 1 FANTOM5 ENCODE 550.8 -1.2 -1243 1.5 HDGF PKNOX1 SMAD1 BACH1 EBF1 BMI1 NFATC1 ATF7 IKZF2 RUNX3 RNU6-586P C1orf141 IL23R SLC35D1 WDR78 IL12RB2 MIER1 INSL5 GC01M067171
GH01I067170 Enhancer 0.7 ENCODE 12.1 -24.8 -24812 1.8 BATF IRF4 ZNF766 NFATC1 ATF7 ETV6 IKZF2 RUNX3 SMARCA5 SRF RNU6-586P C1orf141 ENSG00000252433 GC01M067171 GC01P067166 IL23R
GH01I066996 Enhancer 0.8 ENCODE 9.7 -199.9 -199927 0.2 HDGF CTCF PKNOX1 TFAP4 FOXA2 RB1 ARNT MAX ZNF2 IRF4 WDR78 ENSG00000252433 RNU6-586P SLC35D1
GH01I067463 Enhancer 0.8 ENCODE dbSUPER 9.6 +268.1 268073 2.1 MEIS2 PKNOX1 SIN3A ZIC2 POLR2A ZNF366 SCRT2 ZSCAN5C PRDM1 ZBTB17 RNU4ATAC4P RNU6-586P PIR38616 SERBP1
GH01I067467 Enhancer 0.7 ENCODE dbSUPER 9.6 +272.3 272346 1.1 SMARCE1 NCOA3 RFX1 JUN FOS PIR38616 RNU4ATAC4P RNU6-586P SERBP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-586P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-586P Gene

Genomic Locations for RNU6-586P Gene
chr1:67,196,140-67,196,243
(GRCh38/hg38)
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU6-586P Gene

Genes around RNU6-586P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-586P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-586P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-586P Gene

Proteins for RNU6-586P Gene

Post-translational modifications for RNU6-586P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-586P Gene

Domains & Families for RNU6-586P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-586P Gene

Function for RNU6-586P Gene

Phenotypes From GWAS Catalog for RNU6-586P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-586P Gene

Localization for RNU6-586P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-586P Gene

Pathways & Interactions for RNU6-586P Gene

SuperPathways for RNU6-586P Gene

No Data Available

Interacting Proteins for RNU6-586P Gene

Gene Ontology (GO) - Biological Process for RNU6-586P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-586P Gene

Drugs & Compounds for RNU6-586P Gene

No Compound Related Data Available

Transcripts for RNU6-586P Gene

mRNA/cDNA for RNU6-586P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-586P Gene

No ASD Table

Relevant External Links for RNU6-586P Gene

GeneLoc Exon Structure for
RNU6-586P
ECgene alternative splicing isoforms for
RNU6-586P

Expression for RNU6-586P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-586P Gene

genes like me logo Genes that share expression patterns with RNU6-586P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-586P Gene

Orthologs for RNU6-586P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-586P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 34
  • 71 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22943 34
  • 67 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U6 34
  • 67 (a)
OneToMany
cow
(Bos Taurus)
Mammalia U6 34
  • 66 (a)
ManyToMany
Species where no ortholog for RNU6-586P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-586P Gene

ENSEMBL:
Gene Tree for RNU6-586P (if available)
TreeFam:
Gene Tree for RNU6-586P (if available)

Paralogs for RNU6-586P Gene

No data available for Paralogs for RNU6-586P Gene

Variants for RNU6-586P Gene

Additional Variant Information for RNU6-586P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-586P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-586P Gene

Disorders for RNU6-586P Gene

No disorders were found for RNU6-586P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-586P Gene

Publications for RNU6-586P Gene

No publications were found for RNU6-586P Gene.

Products for RNU6-586P Gene

Sources for RNU6-586P Gene

Content
Loading form....