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Aliases for RNU6-50P Gene

Aliases for RNU6-50P Gene

  • RNA, U6 Small Nuclear 50, Pseudogene 2 3 5
  • RNA, U6 Small Nuclear Pseudogene 1 2 3
  • RNA, U6 Small Nuclear 50 (Pseudogene) 3
  • RNA, U6 Small Nuclear 50 2
  • RNU6-50 3
  • RNU6P1 3
  • U6 3

External Ids for RNU6-50P Gene

Previous HGNC Symbols for RNU6-50P Gene

  • RNU6P1
  • RNU6-50

Previous GeneCards Identifiers for RNU6-50P Gene

  • GC0XP046264
  • GC0XP046378
  • GC0XP044089

Summaries for RNU6-50P Gene

GeneCards Summary for RNU6-50P Gene

RNU6-50P (RNA, U6 Small Nuclear 50, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-50P Gene

Genomics for RNU6-50P Gene

Regulatory Elements for RNU6-50P Gene

Enhancers for RNU6-50P Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RNU6-50P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU6-50P Gene

46,517,523 bp from pter
46,518,000 bp from pter
478 bases
Plus strand

Genomic View for RNU6-50P Gene

Genes around RNU6-50P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-50P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-50P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-50P Gene

Proteins for RNU6-50P Gene

Post-translational modifications for RNU6-50P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-50P Gene

Domains & Families for RNU6-50P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-50P Gene

Function for RNU6-50P Gene

miRNA for RNU6-50P Gene

miRTarBase miRNAs that target RNU6-50P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RNU6-50P Gene

Localization for RNU6-50P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-50P Gene

Pathways & Interactions for RNU6-50P Gene

SuperPathways for RNU6-50P Gene

No Data Available

Interacting Proteins for RNU6-50P Gene

Gene Ontology (GO) - Biological Process for RNU6-50P Gene


No data available for Pathways by source and SIGNOR curated interactions for RNU6-50P Gene

Drugs & Compounds for RNU6-50P Gene

No Compound Related Data Available

Transcripts for RNU6-50P Gene

mRNA/cDNA for RNU6-50P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-50P Gene

No ASD Table

Relevant External Links for RNU6-50P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNU6-50P Gene

mRNA expression in normal human tissues for RNU6-50P Gene

genes like me logo Genes that share expression patterns with RNU6-50P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNU6-50P Gene

Orthologs for RNU6-50P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-50P Gene

Organism Taxonomy Gene Similarity Type Details
(Canis familiaris)
Mammalia U6 36
  • 73 (a)
(Monodelphis domestica)
Mammalia U6 36
  • 76 (a)
(Mus musculus)
Mammalia Gm26271 36
  • 67 (a)
(Ornithorhynchus anatinus)
Mammalia U6 36
  • 66 (a)
(Pan troglodytes)
Mammalia U6 36
  • 100 (a)
Species with no ortholog for RNU6-50P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-50P Gene

Gene Tree for RNU6-50P (if available)
Gene Tree for RNU6-50P (if available)

Paralogs for RNU6-50P Gene

No data available for Paralogs for RNU6-50P Gene

Variants for RNU6-50P Gene

Relevant External Links for RNU6-50P Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-50P Gene

Disorders for RNU6-50P Gene

No disorders were found for RNU6-50P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-50P Gene

Publications for RNU6-50P Gene

  1. Novel structure of a human U6 snRNA pseudogene. (PMID: 2998934) Theissen H. … Appel B. (Gene 1985) 2 3 67
  2. Cross-disorder genome-wide analyses suggest a complex genetic relationship between Tourette's syndrome and OCD. (PMID: 25158072) Yu D. … Pauls D.L. (Am J Psychiatry 2015) 3
  3. Genome-wide association study identifies three novel susceptibility loci for severe Acne vulgaris. (PMID: 24927181) Navarini A.A. … Barker J.N. (Nat Commun 2014) 3
  4. Cwc2 and its human homologue RBM22 promote an active conformation of the spliceosome catalytic centre. (PMID: 22246180) Rasche N. … Luhrmann R. (EMBO J. 2012) 3

Products for RNU6-50P Gene

Sources for RNU6-50P Gene