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Aliases for RNU6-46P Gene

Subcategory (RNA class) for RNU6-46P Gene

snRNA

Aliases for RNU6-46P Gene

  • RNA, U6 Small Nuclear 46, Pseudogene 2 3 5
  • RNA, U6 Small Nuclear 46 2
  • RNU6-46 3

External Ids for RNU6-46P Gene

ORGUL Members for RNU6-46P Gene

Previous HGNC Symbols for RNU6-46P Gene

  • RNU6-46

Previous GeneCards Identifiers for RNU6-46P Gene

  • GC11P067665

Summaries for RNU6-46P Gene

GeneCards Summary for RNU6-46P Gene

RNU6-46P (RNA, U6 Small Nuclear 46, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-46P Gene

Genomics for RNU6-46P Gene

Genomic Location for RNU6-46P Gene

Chromosome:
11
Start:
67,895,631 bp from pter
End:
67,895,737 bp from pter
Size:
107 bases
Orientation:
Plus strand

Genomic View for RNU6-46P Gene

Genes around RNU6-46P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-46P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-46P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-46P Gene

No data available for Regulatory Elements for RNU6-46P Gene

Proteins for RNU6-46P Gene

Post-translational modifications for RNU6-46P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-46P Gene

Domains & Families for RNU6-46P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-46P Gene

Function for RNU6-46P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-46P Gene

Localization for RNU6-46P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-46P Gene

Pathways & Interactions for RNU6-46P Gene

SuperPathways for RNU6-46P Gene

No Data Available

Interacting Proteins for RNU6-46P Gene

Gene Ontology (GO) - Biological Process for RNU6-46P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-46P Gene

Drugs & Compounds for RNU6-46P Gene

No Compound Related Data Available

Transcripts for RNU6-46P Gene

mRNA/cDNA for RNU6-46P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-46P Gene

No ASD Table

Relevant External Links for RNU6-46P Gene

GeneLoc Exon Structure for
RNU6-46P
ECgene alternative splicing isoforms for
RNU6-46P

Expression for RNU6-46P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-46P Gene

genes like me logo Genes that share expression patterns with RNU6-46P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-46P Gene

Orthologs for RNU6-46P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-46P Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia U6 35
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22623 35
  • 96 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U6 35
  • 88 (a)
ManyToMany
Species where no ortholog for RNU6-46P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-46P Gene

ENSEMBL:
Gene Tree for RNU6-46P (if available)
TreeFam:
Gene Tree for RNU6-46P (if available)

Paralogs for RNU6-46P Gene

No data available for Paralogs for RNU6-46P Gene

Variants for RNU6-46P Gene

Structural Variations from Database of Genomic Variants (DGV) for RNU6-46P Gene

Variant ID Type Subtype PubMed ID
dgv1214n100 CNV gain 25217958
dgv1215n100 CNV gain 25217958
dgv1216n100 CNV gain+loss 25217958
dgv1218n100 CNV gain 25217958
dgv1219n100 CNV loss 25217958
dgv1220n100 CNV gain 25217958
dgv14n64 CNV loss 17921354
dgv155n27 CNV loss 19166990
dgv1981n54 CNV gain 21841781
dgv221e199 CNV deletion 23128226
dgv53n111 CNV deletion 26073780
esv2744651 CNV deletion 23290073
esv2759835 CNV gain+loss 17122850
esv2761681 CNV loss 21179565
esv3626720 CNV loss 21293372
esv3626726 CNV loss 21293372
esv3626727 CNV gain 21293372
esv3892023 CNV gain+loss 25118596
nsv1159911 CNV deletion 26073780
nsv428260 CNV gain 18775914
nsv468606 CNV gain 19166990
nsv468610 CNV loss 19166990
nsv469719 CNV loss 16826518
nsv469856 CNV gain 16826518
nsv516191 CNV gain+loss 19592680
nsv555274 CNV gain 21841781
nsv555276 CNV loss 21841781
nsv818845 CNV loss 17921354
nsv975944 CNV duplication 23825009

Relevant External Links for RNU6-46P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-46P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for RNU6-46P Gene

Disorders for RNU6-46P Gene

No disorders were found for RNU6-46P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-46P Gene

Publications for RNU6-46P Gene

No publications were found for RNU6-46P Gene.

Products for RNU6-46P Gene

Sources for RNU6-46P Gene

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