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Aliases for RNU6-444P Gene

Subcategory (RNA class) for RNU6-444P Gene

snRNA

Aliases for RNU6-444P Gene

  • RNA, U6 Small Nuclear 444, Pseudogene 2 3 5

External Ids for RNU6-444P Gene

ORGUL Members for RNU6-444P Gene

Previous GeneCards Identifiers for RNU6-444P Gene

  • GC06P088200
  • GC00U935168

Summaries for RNU6-444P Gene

GeneCards Summary for RNU6-444P Gene

RNU6-444P (RNA, U6 Small Nuclear 444, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-444P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-444P Gene

Genomics for RNU6-444P Gene

GeneHancer (GH) Regulatory Elements for RNU6-444P Gene

Promoters and enhancers for RNU6-444P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I087570 Enhancer 1 Ensembl ENCODE 10.8 +84.7 84708 4.9 HDAC1 PKNOX1 CLOCK FOXA2 ZSCAN4 ZNF133 NEUROD1 MZF1 SIN3A FEZF1 SLC35A1 RNU6-444P RARS2 AKIRIN2 GC06P087563 GC06P087588
GH06I087421 Enhancer 0.7 ENCODE 10.5 -66.7 -66721 1.1 PKNOX1 NEUROD1 SIN3A CEBPG CTBP1 GATA3 RCOR1 FOS SMARCE1 HCFC1 SLC35A1 RNU6-444P CFAP206 GC06M087427 PIR56225 ENSG00000213204
GH06I087444 Enhancer 0.4 ENCODE 11.3 -43.8 -43755 0.8 SP1 TEAD1 TEAD3 ST13P16 SLC35A1 RNU6-444P LOC100420741 CFAP206 ENSG00000213204
GH06I087627 Enhancer 0.4 ENCODE 10.2 +140.1 140067 2.4 ZNF24 SPI1 SLC35A1 RARS2 ORC3 AKIRIN2 RNU6-444P GC06P087659
GH06I087450 Enhancer 0.2 FANTOM5 11.4 -37.9 -37870 0 RNU6-444P ST13P16 SLC35A1 ENSG00000213204 CFAP206
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-444P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-444P Gene

Genomic Locations for RNU6-444P Gene
chr6:87,488,445-87,488,552
(GRCh38/hg38)
Size:
108 bases
Orientation:
Plus strand

Genomic View for RNU6-444P Gene

Genes around RNU6-444P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-444P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-444P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-444P Gene

Proteins for RNU6-444P Gene

Post-translational modifications for RNU6-444P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-444P Gene

Domains & Families for RNU6-444P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-444P Gene

Function for RNU6-444P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-444P Gene

Localization for RNU6-444P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-444P Gene

Pathways & Interactions for RNU6-444P Gene

SuperPathways for RNU6-444P Gene

No Data Available

Interacting Proteins for RNU6-444P Gene

Gene Ontology (GO) - Biological Process for RNU6-444P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-444P Gene

Drugs & Compounds for RNU6-444P Gene

No Compound Related Data Available

Transcripts for RNU6-444P Gene

mRNA/cDNA for RNU6-444P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-444P Gene

No ASD Table

Relevant External Links for RNU6-444P Gene

GeneLoc Exon Structure for
RNU6-444P
ECgene alternative splicing isoforms for
RNU6-444P

Expression for RNU6-444P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-444P Gene

genes like me logo Genes that share expression patterns with RNU6-444P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-444P Gene

Orthologs for RNU6-444P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-444P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 34
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 34
  • 81 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 34
  • 80 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22779 34
  • 74 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U6 34
  • 74 (a)
OneToMany
Species where no ortholog for RNU6-444P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-444P Gene

ENSEMBL:
Gene Tree for RNU6-444P (if available)
TreeFam:
Gene Tree for RNU6-444P (if available)

Paralogs for RNU6-444P Gene

No data available for Paralogs for RNU6-444P Gene

Variants for RNU6-444P Gene

Additional Variant Information for RNU6-444P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-444P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-444P Gene

Disorders for RNU6-444P Gene

No disorders were found for RNU6-444P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-444P Gene

Publications for RNU6-444P Gene

No publications were found for RNU6-444P Gene.

Products for RNU6-444P Gene

Sources for RNU6-444P Gene

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