Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU6-419P Gene

Aliases for RNU6-419P Gene

  • RNA, U6 Small Nuclear 419, Pseudogene 2 3 5

External Ids for RNU6-419P Gene

Previous GeneCards Identifiers for RNU6-419P Gene

  • GC14M073715
  • GC00U935639

Summaries for RNU6-419P Gene

GeneCards Summary for RNU6-419P Gene

RNU6-419P (RNA, U6 Small Nuclear 419, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-419P Gene

Genomics for RNU6-419P Gene

Regulatory Elements for RNU6-419P Gene

Enhancers for RNU6-419P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F073178 1.2 VISTA Ensembl ENCODE 10.8 +66.4 66366 3.5 MAZ HLF FOXA3 GTF2E2 CEBPB CEBPG EP300 RAD21 NR2F2 YY1 PAPLN LOC100420966 ELMSAN1 RBM25 PSEN1 RNU6-419P NUMB LOC101928123 ENSG00000259109
GH14F073296 1 ENCODE 12.3 -49.8 -49766 1.7 HDGF ATF1 PKNOX1 ARID4B SIN3A YY1 SLC30A9 SP5 NFYC JUNB NUMB RNU6-419P LOC105370561 PAPLN PTGR2 ENSG00000223300 ENSG00000258944 GC14P073395
GH14F073287 1 ENCODE 11.7 -40.5 -40545 0.7 HDGF PKNOX1 MLX ARID4B DMAP1 ZNF48 GATA2 SP5 JUNB MIER2 RNU6-419P PAPLN NUMB ENSG00000258944 GC14P073395
GH14F073286 0.9 ENCODE 11.7 -39.9 -39888 0.2 ELF3 HDAC1 TBL1XR1 MLX DMAP1 RAD21 ZNF48 GATA2 ETV6 CREM NUMB RNU6-419P PAPLN NT5CP2 ENSG00000258944 GC14P073395
GH14F073224 0.8 ENCODE 12.4 +23.6 23563 0.3 TBP CTCF PKNOX1 EBF1 ZIC2 RELA POLR2A EED ZNF143 SMC3 RNU6-419P GC14P073223 GC14P073229 PIR53719
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6-419P on UCSC Golden Path with GeneCards custom track

Promoters for RNU6-419P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000420666 580 1801 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF48 GTF3C2 ZNF143 ZNF263 NFYC

Genomic Location for RNU6-419P Gene

Chromosome:
14
Start:
73,246,818 bp from pter
End:
73,246,880 bp from pter
Size:
63 bases
Orientation:
Minus strand

Genomic View for RNU6-419P Gene

Genes around RNU6-419P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-419P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-419P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-419P Gene

Proteins for RNU6-419P Gene

Post-translational modifications for RNU6-419P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-419P Gene

Domains & Families for RNU6-419P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-419P Gene

Function for RNU6-419P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-419P Gene

Localization for RNU6-419P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-419P Gene

Pathways & Interactions for RNU6-419P Gene

SuperPathways for RNU6-419P Gene

No Data Available

Interacting Proteins for RNU6-419P Gene

Gene Ontology (GO) - Biological Process for RNU6-419P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-419P Gene

Transcripts for RNU6-419P Gene

mRNA/cDNA for RNU6-419P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-419P Gene

No ASD Table

Relevant External Links for RNU6-419P Gene

GeneLoc Exon Structure for
RNU6-419P
ECgene alternative splicing isoforms for
RNU6-419P

Expression for RNU6-419P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU6-419P Gene

Orthologs for RNU6-419P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-419P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 35
  • 100 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 35
  • 50 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22127 35
  • 48 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U6 35
  • 42 (a)
OneToOne
Species where no ortholog for RNU6-419P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-419P Gene

ENSEMBL:
Gene Tree for RNU6-419P (if available)
TreeFam:
Gene Tree for RNU6-419P (if available)

Paralogs for RNU6-419P Gene

No data available for Paralogs for RNU6-419P Gene

Variants for RNU6-419P Gene

Relevant External Links for RNU6-419P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-419P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-419P Gene

Disorders for RNU6-419P Gene

No disorders were found for RNU6-419P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-419P Gene

Publications for RNU6-419P Gene

No publications were found for RNU6-419P Gene.

Products for RNU6-419P Gene

Sources for RNU6-419P Gene

Content
Loading form....