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Aliases for RNU6-370P Gene

Aliases for RNU6-370P Gene

  • RNA, U6 Small Nuclear 370, Pseudogene 2 3 5

External Ids for RNU6-370P Gene

Previous GeneCards Identifiers for RNU6-370P Gene

  • GC02P024271
  • GC00U934576

Summaries for RNU6-370P Gene

GeneCards Summary for RNU6-370P Gene

RNU6-370P (RNA, U6 Small Nuclear 370, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-370P Gene

Genomics for RNU6-370P Gene

Regulatory Elements for RNU6-370P Gene

Enhancers for RNU6-370P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G024045 1.1 ENCODE 0.7 +1.1 1099 2.5 HDGF HNRNPUL1 FOXA2 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B FAM228B PFN4 WDCP FAM228A RNU6-370P
GH02G024009 1.6 FANTOM5 ENCODE dbSUPER 0.3 -34.4 -34381 4.1 HDGF PKNOX1 CREB3L1 ARNT ZFP64 YY1 ZNF766 ZNF592 MEF2D SMARCA4 MFSD2B UBXN2A ATAD2B RNU6-370P
GH02G024014 1.5 Ensembl ENCODE dbSUPER 0.3 -29.5 -29482 3.8 FOXA2 MLX AGO1 ZNF133 ZFP64 ARID4B SIN3A ZNF48 TCF12 SLC30A9 FAM228B FKBP1B PFN4 MFSD2B RNU6-370P
GH02G024021 0.8 ENCODE 0.3 -24.3 -24270 0.2 ELF3 CTCF MXI1 ZNF792 SAP130 ARID4B DMAP1 ZNF48 ZSCAN9 RAD21 MFSD2B RNU6-370P
GH02G024025 0.4 ENCODE 0.4 -19.8 -19757 2.0 CEBPB HOMEZ SF3B6 FAM228B UBXN2A MFSD2B RNU6-370P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6-370P on UCSC Golden Path with GeneCards custom track

Promoters for RNU6-370P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000114009 1365 1201 HDGF HNRNPUL1 FOXA2 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B

Genomic Location for RNU6-370P Gene

Chromosome:
2
Start:
24,045,835 bp from pter
End:
24,045,938 bp from pter
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU6-370P Gene

Genes around RNU6-370P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-370P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-370P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RNU6-370P Gene

Proteins for RNU6-370P Gene

Post-translational modifications for RNU6-370P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-370P Gene

Domains & Families for RNU6-370P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-370P Gene

Function for RNU6-370P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-370P Gene

Localization for RNU6-370P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-370P Gene

Pathways & Interactions for RNU6-370P Gene

SuperPathways for RNU6-370P Gene

No Data Available

Interacting Proteins for RNU6-370P Gene

Gene Ontology (GO) - Biological Process for RNU6-370P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-370P Gene

Drugs & Compounds for RNU6-370P Gene

No Compound Related Data Available

Transcripts for RNU6-370P Gene

mRNA/cDNA for RNU6-370P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-370P Gene

No ASD Table

Relevant External Links for RNU6-370P Gene

GeneLoc Exon Structure for
RNU6-370P
ECgene alternative splicing isoforms for
RNU6-370P

Expression for RNU6-370P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-370P Gene

genes like me logo Genes that share expression patterns with RNU6-370P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-370P Gene

Orthologs for RNU6-370P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-370P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 35
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 35
  • 79 (a)
OneToMany
Species where no ortholog for RNU6-370P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-370P Gene

ENSEMBL:
Gene Tree for RNU6-370P (if available)
TreeFam:
Gene Tree for RNU6-370P (if available)

Paralogs for RNU6-370P Gene

No data available for Paralogs for RNU6-370P Gene

Variants for RNU6-370P Gene

Relevant External Links for RNU6-370P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-370P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-370P Gene

Disorders for RNU6-370P Gene

No disorders were found for RNU6-370P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-370P Gene

Publications for RNU6-370P Gene

No publications were found for RNU6-370P Gene.

Products for RNU6-370P Gene

Sources for RNU6-370P Gene

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