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Aliases for RNU6-359P Gene

Subcategory (RNA class) for RNU6-359P Gene

snRNA

Aliases for RNU6-359P Gene

  • RNA, U6 Small Nuclear 359, Pseudogene 2 3 5

External Ids for RNU6-359P Gene

ORGUL Members for RNU6-359P Gene

Previous GeneCards Identifiers for RNU6-359P Gene

  • GC16M068053
  • GC00U934510

Summaries for RNU6-359P Gene

GeneCards Summary for RNU6-359P Gene

RNU6-359P (RNA, U6 Small Nuclear 359, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-359P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-359P Gene

Genomics for RNU6-359P Gene

GeneHancer (GH) Regulatory Elements for RNU6-359P Gene

Promoters and enhancers for RNU6-359P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I068015 Promoter/Enhancer 1.1 EPDnew FANTOM5 550.8 +1.9 1899 0.3 RFX1 ZBTB21 ZNF629 CREB1 CREM DPEP2NB RNU6-359P GC16M068017 SLC12A4 TSNAXIP1 DPEP3 NFATC3 C16orf86 DUS2
GH16I067992 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 12.3 +22.9 22938 4.1 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 POLR2B ZNF213 E2F8 PRMT7 EDC4 ACD DDX28 E2F4 CENPT KIAA0895L RNU6-359P SLC12A4 LCAT
GH16I067942 Promoter/Enhancer 1.6 EPDnew ENCODE dbSUPER 11.5 +74.0 73998 3.3 HDGF FOXA2 MLX ARID4B SIN3A ZNF48 ETS1 YY1 POLR2B ZNF143 LCAT GC16M067943 DUS2 DPEP3 RNU6-359P PSKH1 C16orf86 ENKD1 NRN1L CENPT
GH16I068061 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.7 -46.1 -46102 5.3 PKNOX1 ARNT ZNF143 FOS ATF7 REST KAT8 SSRP1 SMARCA4 CTCF PRMT7 EDC4 E2F4 ENSG00000263276 CTCF FBXL8 NFATC3 ENSG00000270165 THAP11 DDX28
GH16I068068 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10.7 -53.2 -53206 4.3 HDGF CTCF ZIC2 ZNF121 GATA3 CTBP1 ZNF316 POLR2A NCOR1 ZNF207 DUS2 PRMT7 DPEP3 THAP11 DDX28 RNU6-359P EDC4 CENPT DPEP2 RANBP10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-359P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-359P Gene

Genomic Locations for RNU6-359P Gene
chr16:68,017,710-68,017,817
(GRCh38/hg38)
Size:
108 bases
Orientation:
Minus strand

Genomic View for RNU6-359P Gene

Genes around RNU6-359P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-359P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-359P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for RNU6-359P Gene

Proteins for RNU6-359P Gene

Post-translational modifications for RNU6-359P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-359P Gene

Domains & Families for RNU6-359P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-359P Gene

Function for RNU6-359P Gene

Phenotypes From GWAS Catalog for RNU6-359P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-359P Gene

Localization for RNU6-359P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-359P Gene

Pathways & Interactions for RNU6-359P Gene

SuperPathways for RNU6-359P Gene

No Data Available

Interacting Proteins for RNU6-359P Gene

Gene Ontology (GO) - Biological Process for RNU6-359P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-359P Gene

Drugs & Compounds for RNU6-359P Gene

No Compound Related Data Available

Transcripts for RNU6-359P Gene

mRNA/cDNA for RNU6-359P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-359P Gene

No ASD Table

Relevant External Links for RNU6-359P Gene

GeneLoc Exon Structure for
RNU6-359P
ECgene alternative splicing isoforms for
RNU6-359P

Expression for RNU6-359P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-359P Gene

genes like me logo Genes that share expression patterns with RNU6-359P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-359P Gene

Orthologs for RNU6-359P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-359P Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia U6 34
  • 93 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm22070 34
  • 85 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U6 34
  • 83 (a)
ManyToMany
Species where no ortholog for RNU6-359P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-359P Gene

ENSEMBL:
Gene Tree for RNU6-359P (if available)
TreeFam:
Gene Tree for RNU6-359P (if available)

Paralogs for RNU6-359P Gene

No data available for Paralogs for RNU6-359P Gene

Variants for RNU6-359P Gene

Additional Variant Information for RNU6-359P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-359P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-359P Gene

Disorders for RNU6-359P Gene

No disorders were found for RNU6-359P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-359P Gene

Publications for RNU6-359P Gene

No publications were found for RNU6-359P Gene.

Products for RNU6-359P Gene

Sources for RNU6-359P Gene

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