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Aliases for RNU6-321P Gene

Aliases for RNU6-321P Gene

  • RNA, U6 Small Nuclear 321, Pseudogene 2 3 5

External Ids for RNU6-321P Gene

Previous GeneCards Identifiers for RNU6-321P Gene

  • GC11P125149
  • GC00U935314

Summaries for RNU6-321P Gene

GeneCards Summary for RNU6-321P Gene

RNU6-321P (RNA, U6 Small Nuclear 321, Pseudogene) is a Pseudogene.

Additional gene information for RNU6-321P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-321P Gene

Genomics for RNU6-321P Gene

GeneHancer (GH) Regulatory Elements for RNU6-321P Gene

Promoters and enhancers for RNU6-321P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I125276 Enhancer 0.8 FANTOM5 dbSUPER 550.8 -0.9 -856 0.4 FOXA2 NFIA MAFG ZNF398 FEZF1 ZNF843 ZFP69B PRDM6 ZNF316 MAFK RNU6-321P GC11M125262 PKNOX2
GH11I125275 Enhancer 0.7 FANTOM5 dbSUPER 550.8 -1.5 -1465 0.2 ZFP69B FEZF1 ZNF843 PRDM1 SP7 ZBTB17 RNU6-321P PKNOX2 FEZ1 GC11M125262
GH11I125163 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 10.4 -110.2 -110159 8.6 PKNOX1 FEZF1 GLIS2 ZNF213 ZNF143 ZNF202 SP3 TSHZ1 ZNF623 ZSCAN16 PKNOX2 CCDC15 MSANTD2 ENSG00000255475 LOC105369549 TMEM218 RNU6-321P STT3A ENSG00000254509 DDX25
GH11I125342 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.3 +67.3 67316 5.3 CTCF KLF1 RB1 ZNF449 ZIC2 RAD21 GATA3 POLR2A ZNF366 ZNF143 LOC105369549 RNU6-321P GC11M125348 GC11M125336 PKNOX2
GH11I125370 Enhancer 1 Ensembl ENCODE dbSUPER 10.3 +93.9 93886 1.9 MXI1 RFX1 BMI1 ZIC2 ETS1 SP1 POLR2A EZH2 CHD2 GC11M125369 GC11M125370 GC11P125369 LOC105369549 RNU6-321P PKNOX2 PKNOX2-AS1 ROBO4 DDX25
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-321P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-321P Gene

Genomic Locations for RNU6-321P Gene
chr11:125,277,552-125,277,657
(GRCh38/hg38)
Size:
106 bases
Orientation:
Plus strand

Genomic View for RNU6-321P Gene

Genes around RNU6-321P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-321P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-321P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-321P Gene

Proteins for RNU6-321P Gene

Post-translational modifications for RNU6-321P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-321P Gene

Domains & Families for RNU6-321P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-321P Gene

Function for RNU6-321P Gene

Phenotypes From GWAS Catalog for RNU6-321P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-321P Gene

Localization for RNU6-321P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-321P Gene

Pathways & Interactions for RNU6-321P Gene

SuperPathways for RNU6-321P Gene

No Data Available

Interacting Proteins for RNU6-321P Gene

Gene Ontology (GO) - Biological Process for RNU6-321P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-321P Gene

Drugs & Compounds for RNU6-321P Gene

No Compound Related Data Available

Transcripts for RNU6-321P Gene

mRNA/cDNA for RNU6-321P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-321P Gene

No ASD Table

Relevant External Links for RNU6-321P Gene

GeneLoc Exon Structure for
RNU6-321P
ECgene alternative splicing isoforms for
RNU6-321P

Expression for RNU6-321P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-321P Gene

genes like me logo Genes that share expression patterns with RNU6-321P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-321P Gene

Orthologs for RNU6-321P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-321P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 34
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 34
  • 76 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 34
  • 75 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25579 34
  • 73 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U6 34
  • 82 (a)
OneToOne
Species where no ortholog for RNU6-321P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-321P Gene

ENSEMBL:
Gene Tree for RNU6-321P (if available)
TreeFam:
Gene Tree for RNU6-321P (if available)

Paralogs for RNU6-321P Gene

No data available for Paralogs for RNU6-321P Gene

Variants for RNU6-321P Gene

Additional Variant Information for RNU6-321P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-321P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-321P Gene

Disorders for RNU6-321P Gene

No disorders were found for RNU6-321P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-321P Gene

Publications for RNU6-321P Gene

No publications were found for RNU6-321P Gene.

Products for RNU6-321P Gene

Sources for RNU6-321P Gene

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