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Aliases for RNU6-237P Gene

Subcategory (RNA class) for RNU6-237P Gene

snRNA

Aliases for RNU6-237P Gene

  • RNA, U6 Small Nuclear 237, Pseudogene 2 3 5

External Ids for RNU6-237P Gene

ORGUL Members for RNU6-237P Gene

Previous GeneCards Identifiers for RNU6-237P Gene

  • GC00U935680

Summaries for RNU6-237P Gene

GeneCards Summary for RNU6-237P Gene

RNU6-237P (RNA, U6 Small Nuclear 237, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-237P Gene

Genomics for RNU6-237P Gene

Regulatory Elements for RNU6-237P Gene

Enhancers for RNU6-237P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F074570 1.5 FANTOM5 Ensembl ENCODE 10.7 +114.5 114539 1.2 ARID4B DMAP1 ZNF48 YY1 MXD4 MIER2 PPARG KAT8 MIER3 RCOR2 RFWD3 GLG1 RNU6-237P CLEC18B FA2H GC16P074552
GH16F074740 1.7 FANTOM5 Ensembl ENCODE 9.4 +286.7 286650 5.1 ATF1 ARID4B SIN3A BRCA1 ZNF2 ZNF48 ZNF121 GLIS2 ELK1 ZNF143 FA2H ENSG00000214331 ENSG00000259972 RPL21P118 ENSG00000260884 MLKL CFDP1 RNU6-237P RFWD3
GH16F074479 1.1 Ensembl ENCODE 11.7 +23.9 23940 2.8 KLF1 ZNF792 SIN3A FEZF1 RAD21 RFX5 ZNF664 ZFHX2 CTBP1 SMC3 RFWD3 CLEC18B RNU6-237P GC16M074463 ENSG00000207525 RPS10P23
GH16F074577 1.2 Ensembl ENCODE 10.6 +121.8 121760 2.6 ZFP64 FEZF1 GTF3C2 FOS SP3 YY2 JUNB REST TSHZ1 ZNF518A RFWD3 GLG1 RPL21P118 ENSG00000214331 ENSG00000259972 ENSG00000260884 CFDP1 TMEM231 ENSG00000261783 RNU6-237P
GH16F074562 1.2 Ensembl ENCODE 10.2 +107.6 107560 4.2 PKNOX1 ATF1 ARNT CREB3L1 FEZF1 FOS JUNB REST ZNF518A MEF2D GLG1 RFWD3 RNU6-237P GC16P074552
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6-237P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU6-237P Gene

Chromosome:
16
Start:
74,456,541 bp from pter
End:
74,456,611 bp from pter
Size:
71 bases
Orientation:
Plus strand

Genomic View for RNU6-237P Gene

Genes around RNU6-237P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-237P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-237P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-237P Gene

Proteins for RNU6-237P Gene

Post-translational modifications for RNU6-237P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-237P Gene

Domains & Families for RNU6-237P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-237P Gene

Function for RNU6-237P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-237P Gene

Localization for RNU6-237P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-237P Gene

Pathways & Interactions for RNU6-237P Gene

SuperPathways for RNU6-237P Gene

No Data Available

Interacting Proteins for RNU6-237P Gene

Gene Ontology (GO) - Biological Process for RNU6-237P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-237P Gene

Transcripts for RNU6-237P Gene

mRNA/cDNA for RNU6-237P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-237P Gene

No ASD Table

Relevant External Links for RNU6-237P Gene

GeneLoc Exon Structure for
RNU6-237P
ECgene alternative splicing isoforms for
RNU6-237P

Expression for RNU6-237P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU6-237P Gene

genes like me logo Genes that share expression patterns with RNU6-237P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU6-237P Gene

Orthologs for RNU6-237P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-237P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 35
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U6 35
  • 55 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U6 35
  • 53 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia U6 35
  • 49 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia U6 35
  • 46 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U6 35
  • 50 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii U6 35
  • 53 (a)
OneToMany
Species where no ortholog for RNU6-237P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU6-237P Gene

ENSEMBL:
Gene Tree for RNU6-237P (if available)
TreeFam:
Gene Tree for RNU6-237P (if available)

Paralogs for RNU6-237P Gene

No data available for Paralogs for RNU6-237P Gene

Variants for RNU6-237P Gene

Relevant External Links for RNU6-237P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-237P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-237P Gene

Disorders for RNU6-237P Gene

No disorders were found for RNU6-237P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-237P Gene

Publications for RNU6-237P Gene

No publications were found for RNU6-237P Gene.

Products for RNU6-237P Gene

Sources for RNU6-237P Gene

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