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Aliases for RNU6-152P Gene

Subcategory (RNA class) for RNU6-152P Gene

snRNA

Aliases for RNU6-152P Gene

  • RNA, U6 Small Nuclear 152, Pseudogene 2 3 5

External Ids for RNU6-152P Gene

ORGUL Members for RNU6-152P Gene

Previous GeneCards Identifiers for RNU6-152P Gene

  • GC01P182301
  • GC00U934582

Summaries for RNU6-152P Gene

GeneCards Summary for RNU6-152P Gene

RNU6-152P (RNA, U6 Small Nuclear 152, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-152P Gene

Genomics for RNU6-152P Gene

Regulatory Elements for RNU6-152P Gene

Enhancers for RNU6-152P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G182299 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -26.1 -26077 3.7 HDGF FOXA2 PKNOX1 MLX CREB3L1 ARNT ARID4B SIN3A YBX1 FEZF1 GLUL RNU6-152P RPL18P2 LAMC1 EIF1P3 LINC01344 YPEL5P1
GH01G182288 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -36.1 -36135 5.3 HDGF HNRNPUL1 FOXA2 PKNOX1 MLX CREB3L1 ARNT ARID4B FEZF1 YY1 RNU6-152P RPL18P2 GLUL EIF1P3 LINC01344 YPEL5P1
GH01G182257 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -67.8 -67826 3.3 PKNOX1 ATF1 CREB3L1 FEZF1 TCF12 ZNF766 CBX5 ELK1 GATA2 KLF13 GLUL TEDDM1 RNU6-152P RPL18P2 RNASEL LINC01344 YPEL5P1
GH01G182142 2 FANTOM5 Ensembl ENCODE dbSUPER 9.9 -180.4 -180421 7.8 PKNOX1 ARNT WRNIP1 YY1 ZNF143 DEK REST TBX21 ZNF592 SMARCA4 GLUL TEDDM1 RNU6-152P RPL18P2 RGS16 RGSL1 RNASEL ENSG00000232309 GC01M182183
GH01G182173 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10.6 -152.2 -152204 2.5 FOXA2 PKNOX1 ARNT FEZF1 GLI4 ZNF2 ZNF143 KLF7 DEK TSHZ1 GLUL TEDDM1 RPL18P2 RNU6-152P RNASEL GC01M182183 ENSG00000232309
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU6-152P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU6-152P Gene

Chromosome:
1
Start:
182,327,068 bp from pter
End:
182,327,174 bp from pter
Size:
107 bases
Orientation:
Plus strand

Genomic View for RNU6-152P Gene

Genes around RNU6-152P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-152P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-152P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-152P Gene

Proteins for RNU6-152P Gene

Post-translational modifications for RNU6-152P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-152P Gene

Domains & Families for RNU6-152P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-152P Gene

Function for RNU6-152P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-152P Gene

Localization for RNU6-152P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU6-152P Gene

Pathways & Interactions for RNU6-152P Gene

SuperPathways for RNU6-152P Gene

No Data Available

Interacting Proteins for RNU6-152P Gene

Gene Ontology (GO) - Biological Process for RNU6-152P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-152P Gene

Transcripts for RNU6-152P Gene

mRNA/cDNA for RNU6-152P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-152P Gene

No ASD Table

Relevant External Links for RNU6-152P Gene

GeneLoc Exon Structure for
RNU6-152P
ECgene alternative splicing isoforms for
RNU6-152P

Expression for RNU6-152P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-152P Gene

genes like me logo Genes that share expression patterns with RNU6-152P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-152P Gene

Orthologs for RNU6-152P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-152P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 35
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U6 35
  • 79 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U6 35
  • 76 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia U6 35
  • 73 (a)
ManyToMany
Species where no ortholog for RNU6-152P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-152P Gene

ENSEMBL:
Gene Tree for RNU6-152P (if available)
TreeFam:
Gene Tree for RNU6-152P (if available)

Paralogs for RNU6-152P Gene

No data available for Paralogs for RNU6-152P Gene

Variants for RNU6-152P Gene

Relevant External Links for RNU6-152P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-152P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-152P Gene

Disorders for RNU6-152P Gene

No disorders were found for RNU6-152P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-152P Gene

Publications for RNU6-152P Gene

No publications were found for RNU6-152P Gene.

Products for RNU6-152P Gene

Sources for RNU6-152P Gene

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