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Aliases for RNU6-1255P Gene

Subcategory (RNA class) for RNU6-1255P Gene

snRNA

Aliases for RNU6-1255P Gene

  • RNA, U6 Small Nuclear 1255, Pseudogene 2 3 5

External Ids for RNU6-1255P Gene

ORGUL Members for RNU6-1255P Gene

Previous GeneCards Identifiers for RNU6-1255P Gene

  • GC08M131083
  • GC00U935069

Summaries for RNU6-1255P Gene

GeneCards Summary for RNU6-1255P Gene

RNU6-1255P (RNA, U6 Small Nuclear 1255, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-1255P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-1255P Gene

Genomics for RNU6-1255P Gene

GeneHancer (GH) Regulatory Elements for RNU6-1255P Gene

Promoters and enhancers for RNU6-1255P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I130066 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.3 1261 3.3 PKNOX1 TEAD4 BMI1 ZKSCAN1 FOSL1 TCF12 ZNF316 ZNF366 VEZF1 CBFA2T2 RNU6-1255P GC08M130070 RNU7-181P FAM49B ASAP1
GH08I129970 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.9 +96.7 96674 4.8 HDGF ATF1 FOXA2 YBX1 IRF4 ZNF121 ARID2 ZNF143 FOS ATF7 RNU7-181P FAM49B RNU6-1255P ASAP1 GC08M129961
GH08I130094 Enhancer 1.1 Ensembl ENCODE dbSUPER 12.1 -25.4 -25390 0.5 SIX4 CTCF CLOCK FOXA2 RAD21 YY1 RFX5 ZNF143 SMC3 ZNF444 FAM49B RNU6-1255P ASAP1-IT2 ENSG00000212342 ASAP1
GH08I130096 Enhancer 1 Ensembl ENCODE dbSUPER 12.1 -27.7 -27710 3.5 MXI1 L3MBTL2 NFIB JUN MAX SIN3A MNT JUND ZSCAN16 NFE2 FAM49B RNU6-1255P RNU7-181P ASAP1 ASAP1-IT2 ENSG00000212342
GH08I129981 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 10.4 +87.5 87476 1.2 CREB1 ZBTB17 RNU7-181P FAM49B RNU6-1255P GC08M129961
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-1255P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-1255P Gene

Genomic Locations for RNU6-1255P Gene
chr8:130,069,541-130,069,652
(GRCh38/hg38)
Size:
112 bases
Orientation:
Minus strand

Genomic View for RNU6-1255P Gene

Genes around RNU6-1255P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-1255P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-1255P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-1255P Gene

Proteins for RNU6-1255P Gene

Post-translational modifications for RNU6-1255P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-1255P Gene

Domains & Families for RNU6-1255P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-1255P Gene

Function for RNU6-1255P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-1255P Gene

Localization for RNU6-1255P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-1255P Gene

Pathways & Interactions for RNU6-1255P Gene

SuperPathways for RNU6-1255P Gene

No Data Available

Interacting Proteins for RNU6-1255P Gene

Gene Ontology (GO) - Biological Process for RNU6-1255P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-1255P Gene

Drugs & Compounds for RNU6-1255P Gene

No Compound Related Data Available

Expression for RNU6-1255P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-1255P Gene

genes like me logo Genes that share expression patterns with RNU6-1255P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-1255P Gene

Orthologs for RNU6-1255P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU6-1255P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia U6 34
  • 95 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U6 34
  • 87 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U6 34
  • 69 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea U6 34
  • 69 (a)
ManyToMany
Species where no ortholog for RNU6-1255P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-1255P Gene

ENSEMBL:
Gene Tree for RNU6-1255P (if available)
TreeFam:
Gene Tree for RNU6-1255P (if available)

Paralogs for RNU6-1255P Gene

No data available for Paralogs for RNU6-1255P Gene

Variants for RNU6-1255P Gene

Additional Variant Information for RNU6-1255P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-1255P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-1255P Gene

Disorders for RNU6-1255P Gene

No disorders were found for RNU6-1255P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-1255P Gene

Publications for RNU6-1255P Gene

No publications were found for RNU6-1255P Gene.

Products for RNU6-1255P Gene

Sources for RNU6-1255P Gene

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