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Aliases for RNU6-110P Gene

Subcategory (RNA class) for RNU6-110P Gene

snRNA

Aliases for RNU6-110P Gene

  • RNA, U6 Small Nuclear 110, Pseudogene 2 3 5

External Ids for RNU6-110P Gene

ORGUL Members for RNU6-110P Gene

Previous GeneCards Identifiers for RNU6-110P Gene

  • GC01P026292
  • GC00U934417

Summaries for RNU6-110P Gene

GeneCards Summary for RNU6-110P Gene

RNU6-110P (RNA, U6 Small Nuclear 110, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU6-110P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU6-110P Gene

Genomics for RNU6-110P Gene

GeneHancer (GH) Regulatory Elements for RNU6-110P Gene

Promoters and enhancers for RNU6-110P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I025903 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.8 -58.6 -58581 4.9 HDGF CLOCK SMAD1 FOXA2 ARNT MLX ARID4B SIN3A DMAP1 ZNF2 LOC105376885 PIR46219 MIR3917 STMN1 MTFR1L GPN2 ENSG00000261349 ARID1A HMGN2 PIGV
GH01I025988 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.7 +27.6 27561 7.3 HDAC1 PKNOX1 TAF9B SIN3A ZBTB40 TCF12 ZNF121 ZBTB11 ZEB2 PPARG PAFAH2 RNU6-110P STMN1 EXTL1 SLC30A2 TRIM63 FAM110D PIR35611 GC01M025975
GH01I025888 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.9 -71.6 -71564 8 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A IRF4 E2F8 ZNF143 FOS SELENON MTFR1L ARID1A PAFAH2 ENSG00000252190 ENSG00000252691 EXTL1 RNU6-110P SLC30A2 TRIM63
GH01I025917 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.4 -46.0 -46049 1.1 HDAC1 PKNOX1 ETV1 TEAD4 E4F1 ZFHX2 EGR1 CBFA2T2 CREM EGR2 RNU6-110P ENSG00000252190 ENSG00000252691 EXTL1 SLC30A2 MTFR1L STMN1 GC01P025966
GH01I025932 Enhancer 1 dbSUPER 12.4 -30.4 -30394 1.9 HDGF PKNOX1 ATF1 ARNT TCF12 POLR2B ZNF766 GATA2 E2F8 ATF7 MTFR1L RNU6-110P STMN1 ENSG00000252190 ENSG00000252691 EXTL1 TRIM63 FAM110D SELENON GC01P025966
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU6-110P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU6-110P Gene

Genomic Locations for RNU6-110P Gene
chr1:25,964,197-25,964,300
(GRCh38/hg38)
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU6-110P Gene

Genes around RNU6-110P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU6-110P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU6-110P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU6-110P Gene

Proteins for RNU6-110P Gene

Post-translational modifications for RNU6-110P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU6-110P Gene

Domains & Families for RNU6-110P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU6-110P Gene

Function for RNU6-110P Gene

Phenotypes From GWAS Catalog for RNU6-110P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU6-110P Gene

Localization for RNU6-110P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU6-110P Gene

Pathways & Interactions for RNU6-110P Gene

SuperPathways for RNU6-110P Gene

No Data Available

Interacting Proteins for RNU6-110P Gene

Gene Ontology (GO) - Biological Process for RNU6-110P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU6-110P Gene

Drugs & Compounds for RNU6-110P Gene

No Compound Related Data Available

Transcripts for RNU6-110P Gene

mRNA/cDNA for RNU6-110P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU6-110P Gene

No ASD Table

Relevant External Links for RNU6-110P Gene

GeneLoc Exon Structure for
RNU6-110P
ECgene alternative splicing isoforms for
RNU6-110P

Expression for RNU6-110P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU6-110P Gene

genes like me logo Genes that share expression patterns with RNU6-110P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU6-110P Gene

Orthologs for RNU6-110P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU6-110P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U6 34
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm24887 34
  • 71 (a)
OneToMany
dog
(Canis familiaris)
Mammalia U6 34
  • 70 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U6 34
  • 69 (a)
OneToOne
Species where no ortholog for RNU6-110P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU6-110P Gene

ENSEMBL:
Gene Tree for RNU6-110P (if available)
TreeFam:
Gene Tree for RNU6-110P (if available)

Paralogs for RNU6-110P Gene

No data available for Paralogs for RNU6-110P Gene

Variants for RNU6-110P Gene

Additional Variant Information for RNU6-110P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU6-110P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU6-110P Gene

Disorders for RNU6-110P Gene

No disorders were found for RNU6-110P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU6-110P Gene

Publications for RNU6-110P Gene

No publications were found for RNU6-110P Gene.

Products for RNU6-110P Gene

Sources for RNU6-110P Gene

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