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Aliases for RNU5F-5P Gene

Aliases for RNU5F-5P Gene

  • RNA, U5F Small Nuclear 5, Pseudogene 2 3

External Ids for RNU5F-5P Gene

Previous GeneCards Identifiers for RNU5F-5P Gene

  • GC00U933114
  • GC22M030309
  • GC22U900866

Summaries for RNU5F-5P Gene

GeneCards Summary for RNU5F-5P Gene

RNU5F-5P (RNA, U5F Small Nuclear 5, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU5F-5P Gene

Genomics for RNU5F-5P Gene

Regulatory Elements for RNU5F-5P Gene

Enhancers for RNU5F-5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G029616 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +288.1 288126 11.6 PKNOX1 FOXA2 SIN3A FEZF1 YY1 ZNF121 GATA2 ZNF143 FOS SP3 THOC5 NIPSNAP1 RNU5F-5P GAS2L1 NF2 RPEP4 PIR57472
GH22G029882 1.3 ENCODE dbSUPER 11.8 +27.1 27113 2.5 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 ZNF121 RNU5F-5P ASCC2 MTMR3 RNU6-331P GC22M029900
GH22G029780 1.5 Ensembl ENCODE dbSUPER 10.2 +129.2 129216 2.8 PKNOX1 ARNT ARID4B SIN3A TCF12 CBX5 GATA2 FOS NCOA1 REST ASCC2 HORMAD2-AS1 RNU5F-5P UQCR10
GH22G029640 1.5 FANTOM5 Ensembl ENCODE 10 +269.2 269227 1.4 PKNOX1 ZSCAN4 INSM2 KLF17 FEZF1 GLIS2 ZNF366 ZSCAN5C SCRT2 FOS THOC5 RNU5F-5P SEC14L2 ENSG00000249590 NF2 NIPSNAP1 MTMR3 PIR57472 RPEP4
GH22G029992 1.3 Ensembl ENCODE 11 -83.3 -83255 3.4 PKNOX1 FOXA2 ARID4B FEZF1 YBX1 ZNF2 ZNF143 ZNF207 FOS TSHZ1 MTMR3 ASCC2 HORMAD2-AS1 RNU5F-5P LIF THOC5 MIR6818
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU5F-5P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU5F-5P Gene

Chromosome:
22
Start:
29,910,788 bp from pter
End:
29,910,840 bp from pter
Size:
53 bases
Orientation:
Minus strand

Genomic View for RNU5F-5P Gene

Genes around RNU5F-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU5F-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU5F-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU5F-5P Gene

Proteins for RNU5F-5P Gene

Post-translational modifications for RNU5F-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU5F-5P Gene

Domains & Families for RNU5F-5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU5F-5P Gene

Function for RNU5F-5P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU5F-5P Gene

Localization for RNU5F-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU5F-5P Gene

Pathways & Interactions for RNU5F-5P Gene

SuperPathways for RNU5F-5P Gene

No Data Available

Interacting Proteins for RNU5F-5P Gene

Gene Ontology (GO) - Biological Process for RNU5F-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU5F-5P Gene

Drugs & Compounds for RNU5F-5P Gene

No Compound Related Data Available

Transcripts for RNU5F-5P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNU5F-5P Gene

No ASD Table

Relevant External Links for RNU5F-5P Gene

GeneLoc Exon Structure for
RNU5F-5P
ECgene alternative splicing isoforms for
RNU5F-5P

No data available for mRNA/cDNA for RNU5F-5P Gene

Expression for RNU5F-5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU5F-5P Gene

Orthologs for RNU5F-5P Gene

No data available for Orthologs and Evolution for RNU5F-5P Gene

Paralogs for RNU5F-5P Gene

No data available for Paralogs for RNU5F-5P Gene

Variants for RNU5F-5P Gene

Relevant External Links for RNU5F-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU5F-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU5F-5P Gene

Disorders for RNU5F-5P Gene

No disorders were found for RNU5F-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU5F-5P Gene

Publications for RNU5F-5P Gene

No publications were found for RNU5F-5P Gene.

Products for RNU5F-5P Gene

Sources for RNU5F-5P Gene

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