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Aliases for RNU5E-9P Gene

Aliases for RNU5E-9P Gene

  • RNA, U5E Small Nuclear 9, Pseudogene 2 3 5

External Ids for RNU5E-9P Gene

Previous GeneCards Identifiers for RNU5E-9P Gene

  • GC00U933455
  • GC02P179009

Summaries for RNU5E-9P Gene

GeneCards Summary for RNU5E-9P Gene

RNU5E-9P (RNA, U5E Small Nuclear 9, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU5E-9P Gene

Genomics for RNU5E-9P Gene

Regulatory Elements for RNU5E-9P Gene

Enhancers for RNU5E-9P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G178245 0.4 ENCODE 10.9 +103.8 103829 1.4 PRDM1 SPI1 OSBPL6 RNU5E-9P LOC100130691 GC02M178241 GC02M178285
GH02G178152 0.8 ENCODE 0.4 +10.6 10586 1.7 FOXA2 MAX CEBPG RAD21 RARA YY1 MAFK THAP11 SOX5 GATAD2A OSBPL6 GC02M178161 RNU5E-9P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU5E-9P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU5E-9P Gene

Chromosome:
2
Start:
178,142,548 bp from pter
End:
178,142,651 bp from pter
Size:
104 bases
Orientation:
Plus strand

Genomic View for RNU5E-9P Gene

Genes around RNU5E-9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU5E-9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU5E-9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU5E-9P Gene

Proteins for RNU5E-9P Gene

Post-translational modifications for RNU5E-9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU5E-9P Gene

Domains & Families for RNU5E-9P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU5E-9P Gene

Function for RNU5E-9P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU5E-9P Gene

Localization for RNU5E-9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU5E-9P Gene

Pathways & Interactions for RNU5E-9P Gene

SuperPathways for RNU5E-9P Gene

No Data Available

Interacting Proteins for RNU5E-9P Gene

Gene Ontology (GO) - Biological Process for RNU5E-9P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU5E-9P Gene

Drugs & Compounds for RNU5E-9P Gene

No Compound Related Data Available

Transcripts for RNU5E-9P Gene

mRNA/cDNA for RNU5E-9P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU5E-9P Gene

No ASD Table

Relevant External Links for RNU5E-9P Gene

GeneLoc Exon Structure for
RNU5E-9P
ECgene alternative splicing isoforms for
RNU5E-9P

Expression for RNU5E-9P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU5E-9P Gene

genes like me logo Genes that share expression patterns with RNU5E-9P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU5E-9P Gene

Orthologs for RNU5E-9P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU5E-9P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U5 35
  • 100 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia U5 35
  • 73 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U5 35
  • 65 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U5 35
  • 62 (a)
ManyToMany
Species where no ortholog for RNU5E-9P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU5E-9P Gene

ENSEMBL:
Gene Tree for RNU5E-9P (if available)
TreeFam:
Gene Tree for RNU5E-9P (if available)

Paralogs for RNU5E-9P Gene

No data available for Paralogs for RNU5E-9P Gene

Variants for RNU5E-9P Gene

Relevant External Links for RNU5E-9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU5E-9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU5E-9P Gene

Disorders for RNU5E-9P Gene

No disorders were found for RNU5E-9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU5E-9P Gene

Publications for RNU5E-9P Gene

No publications were found for RNU5E-9P Gene.

Products for RNU5E-9P Gene

Sources for RNU5E-9P Gene

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