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Aliases for RNU5E-2P Gene

Aliases for RNU5E-2P Gene

  • RNA, U5E Small Nuclear 2, Pseudogene 2 3

External Ids for RNU5E-2P Gene

Previous GeneCards Identifiers for RNU5E-2P Gene

  • GC00U933117
  • GC01M236027

Summaries for RNU5E-2P Gene

GeneCards Summary for RNU5E-2P Gene

RNU5E-2P (RNA, U5E Small Nuclear 2, Pseudogene) is a Pseudogene.

Additional gene information for RNU5E-2P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU5E-2P Gene

Genomics for RNU5E-2P Gene

GeneHancer (GH) Regulatory Elements for RNU5E-2P Gene

Promoters and enhancers for RNU5E-2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I235971 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -108.7 -108683 2.1 MLX ARID4B SIN3A DMAP1 ZNF2 ZNF48 ZNF121 ZNF213 ZNF416 ZNF207 ENSG00000229291 LOC105373212 RNU5E-2P GNG4 GPR137B
GH01I235916 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -57.0 -57038 8.6 PKNOX1 SMAD1 SIN3A FEZF1 ZNF2 ZNF207 FOS JUNB REST GLIS1 LYST ARID4B RNU5E-2P TBCE ENSG00000229291 TOMM20 GPR137B EDARADD RNU6-968P ENSG00000237845
GH01I235952 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -90.9 -90863 3.8 HDGF RB1 BMI1 BATF KLF5 IRF4 RAD21 ZNF207 ZNF143 ATF7 LYST MTR RNU5E-2P ENSG00000273058 ARID4B ENSG00000229291 ENSG00000237845 LOC105373212 LOC105373215
GH01I235944 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -82.9 -82864 3.4 FOXA2 ZSCAN4 DMAP1 RAD21 RARA YY1 THAP11 RXRA REST IKZF1 LYST RNU6-968P RNU5E-2P ENSG00000237845 LOC105373212 ENSG00000229291 LOC105373215
GH01I235936 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -75.5 -75492 4 MEIS2 PKNOX1 TEAD4 MAX EBF1 ZNF2 RELA ZNF121 TCF12 ZFHX2 LYST RNU5E-2P ENSG00000237845 RNU6-968P LOC105373212 LOC105373215
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU5E-2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU5E-2P Gene

Genomic Locations for RNU5E-2P Gene
chr1:235,863,388-235,863,437
(GRCh38/hg38)
Size:
50 bases
Orientation:
Minus strand
chr1:236,026,688-236,026,737
(GRCh37/hg19)

Genomic View for RNU5E-2P Gene

Genes around RNU5E-2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU5E-2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU5E-2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU5E-2P Gene

Proteins for RNU5E-2P Gene

Post-translational modifications for RNU5E-2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU5E-2P Gene

Domains & Families for RNU5E-2P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU5E-2P Gene

Function for RNU5E-2P Gene

Phenotypes From GWAS Catalog for RNU5E-2P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU5E-2P Gene

Localization for RNU5E-2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU5E-2P Gene

Pathways & Interactions for RNU5E-2P Gene

SuperPathways for RNU5E-2P Gene

No Data Available

Interacting Proteins for RNU5E-2P Gene

Gene Ontology (GO) - Biological Process for RNU5E-2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU5E-2P Gene

Drugs & Compounds for RNU5E-2P Gene

No Compound Related Data Available

Transcripts for RNU5E-2P Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU5E-2P Gene

No ASD Table

Relevant External Links for RNU5E-2P Gene

GeneLoc Exon Structure for
RNU5E-2P
ECgene alternative splicing isoforms for
RNU5E-2P

No data available for mRNA/cDNA for RNU5E-2P Gene

Expression for RNU5E-2P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU5E-2P Gene

Orthologs for RNU5E-2P Gene

No data available for Orthologs and Evolution for RNU5E-2P Gene

Paralogs for RNU5E-2P Gene

No data available for Paralogs for RNU5E-2P Gene

Variants for RNU5E-2P Gene

Additional Variant Information for RNU5E-2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU5E-2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU5E-2P Gene

Disorders for RNU5E-2P Gene

No disorders were found for RNU5E-2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU5E-2P Gene

Publications for RNU5E-2P Gene

No publications were found for RNU5E-2P Gene.

Products for RNU5E-2P Gene

Sources for RNU5E-2P Gene

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