Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RNU5E-2P Gene

Aliases for RNU5E-2P Gene

  • RNA, U5E Small Nuclear 2, Pseudogene 2 3

External Ids for RNU5E-2P Gene

Previous GeneCards Identifiers for RNU5E-2P Gene

  • GC00U933117
  • GC01M236027

Summaries for RNU5E-2P Gene

GeneCards Summary for RNU5E-2P Gene

RNU5E-2P (RNA, U5E Small Nuclear 2, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU5E-2P Gene

Genomics for RNU5E-2P Gene

Regulatory Elements for RNU5E-2P Gene

Enhancers for RNU5E-2P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F235929 1.3 FANTOM5 Ensembl ENCODE 11.8 -76.5 -76464 21.4 HDGF PKNOX1 ARNT CREB3L1 ZFP64 SIN3A FEZF1 DMAP1 YBX1 ZNF2 ENSG00000273058 ENSG00000230325 RPS21P1 HEATR1 MTR LYST TBCE LDHAP2 LOC100130485 RPSAP21
GH01F235951 1.2 FANTOM5 Ensembl ENCODE 11.8 -90.5 -90464 5.0 HDGF TBL1XR1 BMI1 RAD21 ZNF143 ZNF207 ETV6 RCOR1 CREM MIXL1 LYST MTR RNU5E-2P ENSG00000273058 ENSG00000229291 ENSG00000237845
GH01F235841 0.7 Ensembl ENCODE 11.6 +20.8 20837 2.8 CTCF PKNOX1 ZNF2 RAD21 ZNF101 ZNF664 SMC3 PRDM10 ZNF654 ZNF362 RNU5E-2P B3GALNT2 LYST LYST-AS1 MIR1537
GH01F235835 1 Ensembl ENCODE 11.5 +28.0 28037 0.8 ZNF589 POLR2A PRDM10 RAD21 RNU5E-2P LYST LYST-AS1 LDHAP2
GH01F235838 0.5 Ensembl 11.4 +25.2 25237 0.4 MTA2 FEZF1 ZIC2 TBX21 PRDM1 ZNF18 NR2F2 RNU5E-2P LYST-AS1 LDHAP2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNU5E-2P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU5E-2P Gene

Chromosome:
1
Start:
235,863,388 bp from pter
End:
235,863,437 bp from pter
Size:
50 bases
Orientation:
Minus strand

Genomic View for RNU5E-2P Gene

Genes around RNU5E-2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU5E-2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU5E-2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU5E-2P Gene

Proteins for RNU5E-2P Gene

Post-translational modifications for RNU5E-2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU5E-2P Gene

Domains & Families for RNU5E-2P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU5E-2P Gene

Function for RNU5E-2P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU5E-2P Gene

Localization for RNU5E-2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU5E-2P Gene

Pathways & Interactions for RNU5E-2P Gene

SuperPathways for RNU5E-2P Gene

No Data Available

Interacting Proteins for RNU5E-2P Gene

Gene Ontology (GO) - Biological Process for RNU5E-2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU5E-2P Gene

Transcripts for RNU5E-2P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RNU5E-2P Gene

No ASD Table

Relevant External Links for RNU5E-2P Gene

GeneLoc Exon Structure for
RNU5E-2P
ECgene alternative splicing isoforms for
RNU5E-2P

No data available for mRNA/cDNA for RNU5E-2P Gene

Expression for RNU5E-2P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU5E-2P Gene

Orthologs for RNU5E-2P Gene

No data available for Orthologs and Evolution for RNU5E-2P Gene

Paralogs for RNU5E-2P Gene

No data available for Paralogs for RNU5E-2P Gene

Variants for RNU5E-2P Gene

Relevant External Links for RNU5E-2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU5E-2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU5E-2P Gene

Disorders for RNU5E-2P Gene

No disorders were found for RNU5E-2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU5E-2P Gene

Publications for RNU5E-2P Gene

No publications were found for RNU5E-2P Gene.

Products for RNU5E-2P Gene

Sources for RNU5E-2P Gene

Content
Loading form....