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Aliases for RNU5B-5P Gene

Aliases for RNU5B-5P Gene

  • RNA, U5B Small Nuclear 5, Pseudogene 2 3

External Ids for RNU5B-5P Gene

Previous GeneCards Identifiers for RNU5B-5P Gene

  • GC09U901009
  • GC09P128188
  • GC09P097800

Summaries for RNU5B-5P Gene

GeneCards Summary for RNU5B-5P Gene

RNU5B-5P (RNA, U5B Small Nuclear 5, Pseudogene) is a Pseudogene.

Additional gene information for RNU5B-5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU5B-5P Gene

Genomics for RNU5B-5P Gene

Regulatory Elements for RNU5B-5P Gene

Enhancers for RNU5B-5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H125428 0.7 ENCODE 0.7 +2.4 2368 0 TBP CTCF KLF1 RB1 ARID4B RAD21 CC2D1A MTA3 GLIS2 SMC3 RNU5B-5P RN7SL30P
GH09H125427 0.5 ENCODE 0.7 +1.9 1948 0 CTCF ZBTB33 ZNF24 RNU5B-5P RN7SL30P
GH09H125470 1.3 Ensembl ENCODE 0.2 +46.8 46806 4 PKNOX1 FOXA2 ATF1 ARNT FEZF1 TCF12 CBX5 GATA2 ATF7 NCOA1 MAPKAP1 RN7SL30P RNU5B-5P
GH09H125460 0.8 ENCODE 0.3 +35.4 35447 1 PKNOX1 FOXA2 MAX FEZF1 RAD21 YY1 CTBP1 GATA3 HNF4G FOS PBX3 RNU5B-5P RN7SL30P
GH09H125446 0.8 ENCODE 0.3 +21.1 21130 0 HDGF PKNOX1 TBL1XR1 MAX EBF1 ATF7 RUNX3 IKZF2 CHD2 SMARCA5 PBX3 RNU5B-5P RN7SL30P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU5B-5P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU5B-5P Gene

Chromosome:
9
Start:
125,425,789 bp from pter
End:
125,425,876 bp from pter
Size:
88 bases
Orientation:
Plus strand

Genomic View for RNU5B-5P Gene

Genes around RNU5B-5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU5B-5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU5B-5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU5B-5P Gene

Proteins for RNU5B-5P Gene

Post-translational modifications for RNU5B-5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU5B-5P Gene

Domains & Families for RNU5B-5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU5B-5P Gene

Function for RNU5B-5P Gene

Phenotypes From GWAS Catalog for RNU5B-5P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNU5B-5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU5B-5P Gene

Localization for RNU5B-5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU5B-5P Gene

Pathways & Interactions for RNU5B-5P Gene

SuperPathways for RNU5B-5P Gene

No Data Available

Interacting Proteins for RNU5B-5P Gene

Gene Ontology (GO) - Biological Process for RNU5B-5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU5B-5P Gene

Drugs & Compounds for RNU5B-5P Gene

No Compound Related Data Available

Transcripts for RNU5B-5P Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RNU5B-5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RNU5B-5P Gene

No ASD Table

Relevant External Links for RNU5B-5P Gene

GeneLoc Exon Structure for
RNU5B-5P
ECgene alternative splicing isoforms for
RNU5B-5P

No data available for mRNA/cDNA for RNU5B-5P Gene

Expression for RNU5B-5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU5B-5P Gene

Orthologs for RNU5B-5P Gene

No data available for Orthologs and Evolution for RNU5B-5P Gene

Paralogs for RNU5B-5P Gene

No data available for Paralogs for RNU5B-5P Gene

Variants for RNU5B-5P Gene

Relevant External Links for RNU5B-5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU5B-5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU5B-5P Gene

Disorders for RNU5B-5P Gene

No disorders were found for RNU5B-5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU5B-5P Gene

Publications for RNU5B-5P Gene

No publications were found for RNU5B-5P Gene.

Products for RNU5B-5P Gene

Sources for RNU5B-5P Gene

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