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Aliases for RNU5B-3P Gene

Subcategory (RNA class) for RNU5B-3P Gene

snRNA

Aliases for RNU5B-3P Gene

  • RNA, U5B Small Nuclear 3, Pseudogene 2 3

External Ids for RNU5B-3P Gene

ORGUL Members for RNU5B-3P Gene

Previous GeneCards Identifiers for RNU5B-3P Gene

  • GC03U900991

Summaries for RNU5B-3P Gene

GeneCards Summary for RNU5B-3P Gene

RNU5B-3P (RNA, U5B Small Nuclear 3, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU5B-3P Gene

Genomics for RNU5B-3P Gene

Genomic Location for RNU5B-3P Gene

Start:
45,034,474 bp from pter
End:
45,034,589 bp from pter
Size:
116 bases
Orientation:
Minus strand

Genomic View for RNU5B-3P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNU5B-3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU5B-3P Gene

No data available for Regulatory Elements for RNU5B-3P Gene

Proteins for RNU5B-3P Gene

Post-translational modifications for RNU5B-3P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU5B-3P Gene

Domains for RNU5B-3P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU5B-3P Gene

Function for RNU5B-3P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNU5B-3P Gene

Localization for RNU5B-3P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU5B-3P Gene

Pathways for RNU5B-3P Gene

SuperPathways for RNU5B-3P Gene

No Data Available

Interacting Proteins for RNU5B-3P Gene

Gene Ontology (GO) - Biological Process for RNU5B-3P Gene

None

No data available for Pathways by source for RNU5B-3P Gene

Transcripts for RNU5B-3P Gene

mRNA/cDNA for RNU5B-3P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU5B-3P Gene

No ASD Table

Relevant External Links for RNU5B-3P Gene

GeneLoc Exon Structure for
RNU5B-3P
ECgene alternative splicing isoforms for
RNU5B-3P

Expression for RNU5B-3P Gene

mRNA expression in normal human tissues for RNU5B-3P Gene

genes like me logo Genes that share expressions with RNU5B-3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for RNU5B-3P Gene

Orthologs for RNU5B-3P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU5B-3P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U5 36
  • 84 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U5 36
  • 65 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U5 36
  • 48 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii U5 36
  • 55 (a)
OneToMany
U5 36
  • 55 (a)
OneToMany
U5 36
  • 57 (a)
OneToMany
U5 36
  • 56 (a)
OneToMany
U5 36
  • 56 (a)
OneToMany
U5 36
  • 51 (a)
OneToMany
U5 36
  • 53 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea U5 36
  • 50 (a)
ManyToMany
U5 36
  • 43 (a)
ManyToMany
U5 36
  • 49 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 53 (a)
ManyToMany
U5 36
  • 47 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 52 (a)
ManyToMany
U5 36
  • 51 (a)
ManyToMany
U5 36
  • 51 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 58 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 49 (a)
ManyToMany
U5 36
  • 51 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 51 (a)
ManyToMany
U5 36
  • 51 (a)
ManyToMany
U5 36
  • 51 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 52 (a)
ManyToMany
U5 36
  • 52 (a)
ManyToMany
U5 36
  • 52 (a)
ManyToMany
U5 36
  • 52 (a)
ManyToMany
U5 36
  • 50 (a)
ManyToMany
U5 36
  • 52 (a)
ManyToMany
Species with no ortholog for RNU5B-3P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU5B-3P Gene

ENSEMBL:
Gene Tree for RNU5B-3P (if available)
TreeFam:
Gene Tree for RNU5B-3P (if available)

Paralogs for RNU5B-3P Gene

No data available for Paralogs for RNU5B-3P Gene

Variants for RNU5B-3P Gene

Relevant External Links for RNU5B-3P Gene

HapMap Linkage Disequilibrium report
RNU5B-3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RNU5B-3P Gene

Disorders for RNU5B-3P Gene

No disorders were found for RNU5B-3P Gene.

No data available for UniProtKB/Swiss-Prot for RNU5B-3P Gene

Publications for RNU5B-3P Gene

No publications were found for RNU5B-3P Gene.

Products for RNU5B-3P Gene

Sources for RNU5B-3P Gene

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