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Aliases for RNU4-81P Gene

Subcategory (RNA class) for RNU4-81P Gene

snRNA

Aliases for RNU4-81P Gene

  • RNA, U4 Small Nuclear 81, Pseudogene 2 3 5

External Ids for RNU4-81P Gene

ORGUL Members for RNU4-81P Gene

Previous GeneCards Identifiers for RNU4-81P Gene

  • GC0XP069672

Summaries for RNU4-81P Gene

GeneCards Summary for RNU4-81P Gene

RNU4-81P (RNA, U4 Small Nuclear 81, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU4-81P Gene

Genomics for RNU4-81P Gene

Regulatory Elements for RNU4-81P Gene

Enhancers for RNU4-81P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF070475 0.9 Ensembl ENCODE 13.5 +28.4 28417 6.8 ZFP64 INSM2 KLF17 GLIS2 ZNF366 SCRT2 FOS EGR2 SMARCC1 SP3 DLG3 DLG3-AS1 RNU4-81P GDPD2 ENSG00000230187
GH0XF070508 0.2 Ensembl 13.1 +57.9 57922 0.8 SOX13 SOX5 JUNB ETV6 DLG3-AS1 RNU4-81P DLG3 ENSG00000230187
GH0XF070525 0.8 ENCODE 12.7 +74.9 74870 0.9 SOX13 ESRRA THRB RAD21 RARA GATA3 CTBP1 NR2F6 FOS TCF7L2 DLG3-AS1 RNU4-81P DLG3 ENSG00000230187
GH0XF070451 0.4 ENCODE 0.8 +1.9 1880 2.1 CTCF RAD21 E2F1 POLR2A PATZ1 EED SMC3 ZBTB20 EGR2 ZNF654 DLG3 DLG3-AS1 RNU4-81P
GH0XF070454 0.8 ENCODE 0.8 +4.5 4533 2.7 PKNOX1 GLI4 ZNF2 GLIS2 ZNF143 KLF7 ZNF263 SP3 NFYC JUNB DLG3-AS1 RNU4-81P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RNU4-81P on UCSC Golden Path with GeneCards custom track

Promoters for RNU4-81P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000160887 1622 1400 CTCF ZNF654 NFIA NRF1 SP2 RAD21 E2F1 POLR2A EED IKZF1

Genomic Location for RNU4-81P Gene

Chromosome:
X
Start:
70,450,879 bp from pter
End:
70,451,022 bp from pter
Size:
144 bases
Orientation:
Plus strand

Genomic View for RNU4-81P Gene

Genes around RNU4-81P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU4-81P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU4-81P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU4-81P Gene

Proteins for RNU4-81P Gene

Post-translational modifications for RNU4-81P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU4-81P Gene

Domains & Families for RNU4-81P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU4-81P Gene

Function for RNU4-81P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU4-81P Gene

Localization for RNU4-81P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU4-81P Gene

Pathways & Interactions for RNU4-81P Gene

SuperPathways for RNU4-81P Gene

No Data Available

Interacting Proteins for RNU4-81P Gene

Gene Ontology (GO) - Biological Process for RNU4-81P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU4-81P Gene

Transcripts for RNU4-81P Gene

mRNA/cDNA for RNU4-81P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU4-81P Gene

No ASD Table

Relevant External Links for RNU4-81P Gene

GeneLoc Exon Structure for
RNU4-81P
ECgene alternative splicing isoforms for
RNU4-81P

Expression for RNU4-81P Gene

mRNA expression in normal human tissues for RNU4-81P Gene

genes like me logo Genes that share expression patterns with RNU4-81P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU4-81P Gene

Orthologs for RNU4-81P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for RNU4-81P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U4 35
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22005 35
  • 81 (a)
OneToMany
Species where no ortholog for RNU4-81P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU4-81P Gene

ENSEMBL:
Gene Tree for RNU4-81P (if available)
TreeFam:
Gene Tree for RNU4-81P (if available)

Paralogs for RNU4-81P Gene

No data available for Paralogs for RNU4-81P Gene

Variants for RNU4-81P Gene

Relevant External Links for RNU4-81P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU4-81P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU4-81P Gene

Disorders for RNU4-81P Gene

No disorders were found for RNU4-81P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU4-81P Gene

Publications for RNU4-81P Gene

No publications were found for RNU4-81P Gene.

Products for RNU4-81P Gene

Sources for RNU4-81P Gene

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