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Aliases for RNU4-73P Gene

Subcategory (RNA class) for RNU4-73P Gene

snRNA

Aliases for RNU4-73P Gene

  • RNA, U4 Small Nuclear 73, Pseudogene 2 3 5

External Ids for RNU4-73P Gene

ORGUL Members for RNU4-73P Gene

Previous GeneCards Identifiers for RNU4-73P Gene

  • GC02M009881

Summaries for RNU4-73P Gene

GeneCards Summary for RNU4-73P Gene

RNU4-73P (RNA, U4 Small Nuclear 73, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU4-73P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU4-73P Gene

Genomics for RNU4-73P Gene

GeneHancer (GH) Regulatory Elements for RNU4-73P Gene

Promoters and enhancers for RNU4-73P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I009738 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.7 1740 2.1 SMARCA5 BCOR PKNOX1 ZBED1 ZMYM3 ZNF217 ADNP KDM1A ZBTB33 SPI1 GC02M009741 RNU4-73P ADAM17 LOC100996549 YWHAQ KLF11 ENSG00000244260
GH02I009740 Enhancer 0.7 ENCODE 550.8 -0.2 -233 1 NFIB JUN MAX USF2 CEBPB EP300 RAD21 RFX5 JUND NFIC GC02M009741 RNU4-73P LOC100996549 ENSG00000240960
GH02I009627 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 11.2 +110.3 110279 5.6 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT MLX ARID4B NEUROD1 SIN3A DMAP1 YWHAQ LOC101929882 ENSG00000239300 CPSF3 RNU4-73P ENSG00000240960 KLF11 TAF1B IAH1 ENSG00000207086
GH02I009763 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -25.4 -25394 5.9 ELF3 PKNOX1 ATF1 SIN3A BATF RAD21 ZNF48 RARA TCF12 EGR1 RNU4-73P ENSG00000233502 LOC100996549 ENSG00000257135 LOC101929882 ADAM17 YWHAQ LOC105373420
GH02I009653 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.3 +84.3 84251 6 PKNOX1 FOXA2 ARID4B SIN3A IRF4 ZNF48 TCF12 GTF3C2 ATF7 FOS YWHAQ RNU4-73P ENSG00000240960 ADAM17 LOC105373419 LOC101926982 LOC105373418
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU4-73P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU4-73P Gene

Genomic Locations for RNU4-73P Gene
chr2:9,740,643-9,740,783
(GRCh38/hg38)
Size:
141 bases
Orientation:
Minus strand
chr2:9,880,772-9,880,912
(GRCh37/hg19)

Genomic View for RNU4-73P Gene

Genes around RNU4-73P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU4-73P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU4-73P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU4-73P Gene

Proteins for RNU4-73P Gene

Post-translational modifications for RNU4-73P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU4-73P Gene

Domains & Families for RNU4-73P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU4-73P Gene

Function for RNU4-73P Gene

Phenotypes From GWAS Catalog for RNU4-73P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU4-73P Gene

Localization for RNU4-73P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU4-73P Gene

Pathways & Interactions for RNU4-73P Gene

SuperPathways for RNU4-73P Gene

No Data Available

Interacting Proteins for RNU4-73P Gene

Gene Ontology (GO) - Biological Process for RNU4-73P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU4-73P Gene

Drugs & Compounds for RNU4-73P Gene

No Compound Related Data Available

Transcripts for RNU4-73P Gene

mRNA/cDNA for RNU4-73P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU4-73P Gene

No ASD Table

Relevant External Links for RNU4-73P Gene

GeneLoc Exon Structure for
RNU4-73P
ECgene alternative splicing isoforms for
RNU4-73P

Expression for RNU4-73P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU4-73P Gene

genes like me logo Genes that share expression patterns with RNU4-73P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU4-73P Gene

Orthologs for RNU4-73P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU4-73P Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia U4 34
  • 79 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U4 34
  • 62 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii U4 34
  • 65 (a)
ManyToMany
Species where no ortholog for RNU4-73P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU4-73P Gene

ENSEMBL:
Gene Tree for RNU4-73P (if available)
TreeFam:
Gene Tree for RNU4-73P (if available)

Paralogs for RNU4-73P Gene

No data available for Paralogs for RNU4-73P Gene

Variants for RNU4-73P Gene

Additional Variant Information for RNU4-73P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU4-73P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU4-73P Gene

Disorders for RNU4-73P Gene

No disorders were found for RNU4-73P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU4-73P Gene

Publications for RNU4-73P Gene

No publications were found for RNU4-73P Gene.

Products for RNU4-73P Gene

Sources for RNU4-73P Gene

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