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Aliases for RNU4-52P Gene

Subcategory (RNA class) for RNU4-52P Gene


Aliases for RNU4-52P Gene

  • RNA, U4 Small Nuclear 52, Pseudogene 2 3 5

External Ids for RNU4-52P Gene

ORGUL Members for RNU4-52P Gene

Previous GeneCards Identifiers for RNU4-52P Gene

  • GC0XP048941

Summaries for RNU4-52P Gene

GeneCards Summary for RNU4-52P Gene

RNU4-52P (RNA, U4 Small Nuclear 52, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for RNU4-52P Gene

  • U4 spliceosomal RNA: U4 small nuclear RNA (U4 snRNA) is a component of the major U2-dependent spliceosome. It forms a duplex with U6, and with each splicing round, it is displaced from U6 (and the spliceosome) in an ATP-dependent manner, allowing U6 to re-fold and create the active site for splicing catalysis. A recycling process involving protein Prp24 re-anneals U4 and U6.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNU4-52P Gene

Genomics for RNU4-52P Gene

Genomic Location for RNU4-52P Gene

49,082,028 bp from pter
49,082,165 bp from pter
138 bases
Plus strand

Genomic View for RNU4-52P Gene

Genes around RNU4-52P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU4-52P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU4-52P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements and RefSeq DNA sequence for RNU4-52P Gene

Proteins for RNU4-52P Gene

Post-translational modifications for RNU4-52P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU4-52P Gene

Domains & Families for RNU4-52P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU4-52P Gene

Function for RNU4-52P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU4-52P Gene

Localization for RNU4-52P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU4-52P Gene

Pathways & Interactions for RNU4-52P Gene

SuperPathways for RNU4-52P Gene

No Data Available

Interacting Proteins for RNU4-52P Gene

Gene Ontology (GO) - Biological Process for RNU4-52P Gene


No data available for Pathways by source and SIGNOR curated interactions for RNU4-52P Gene

Drugs & Compounds for RNU4-52P Gene

No Compound Related Data Available

Transcripts for RNU4-52P Gene

mRNA/cDNA for RNU4-52P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU4-52P Gene

No ASD Table

Relevant External Links for RNU4-52P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNU4-52P Gene

mRNA expression in normal human tissues for RNU4-52P Gene

genes like me logo Genes that share expression patterns with RNU4-52P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNU4-52P Gene

Orthologs for RNU4-52P Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNU4-52P Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia U4 36
  • 62 (a)
(Canis familiaris)
Mammalia U4 36
  • 45 (a)
(Monodelphis domestica)
Mammalia U4 36
  • 50 (a)
(Mus musculus)
Mammalia Gm25270 36
  • 56 (a)
(Pan troglodytes)
Mammalia U4 36
  • 84 (a)
Species with no ortholog for RNU4-52P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU4-52P Gene

Gene Tree for RNU4-52P (if available)
Gene Tree for RNU4-52P (if available)

Paralogs for RNU4-52P Gene

No data available for Paralogs for RNU4-52P Gene

Variants for RNU4-52P Gene

Relevant External Links for RNU4-52P Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU4-52P Gene

Disorders for RNU4-52P Gene

No disorders were found for RNU4-52P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU4-52P Gene

Publications for RNU4-52P Gene

No publications were found for RNU4-52P Gene.

Products for RNU4-52P Gene

Sources for RNU4-52P Gene

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