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Aliases for RNU4-34P Gene

Aliases for RNU4-34P Gene

  • RNA, U4 Small Nuclear 34, Pseudogene 2 3 5

External Ids for RNU4-34P Gene

Previous GeneCards Identifiers for RNU4-34P Gene

  • GC17P027716

Summaries for RNU4-34P Gene

GeneCards Summary for RNU4-34P Gene

RNU4-34P (RNA, U4 Small Nuclear 34, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU4-34P Gene

Genomics for RNU4-34P Gene

Regulatory Elements for RNU4-34P Gene

Enhancers for RNU4-34P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F029255 1.4 FANTOM5 Ensembl ENCODE 11.3 -132.0 -132004 3.1 PKNOX1 CBX3 ARNT ZNF121 ZNF263 SMARCA5 ZBTB2 CEBPB ZEB2 PBX2 MYO18A NUFIP2 MIR4523 RNU4-34P TAOK1 TIAF1 CRYBA1
GH17F029450 0.6 ENCODE 12 +61.8 61798 0.2 ZFHX2 ZNF366 HNF4G ZBTB33 NR2F2 EGR2 RXRB RNU6-711P TAOK1 MIR4523 RNU4-34P RNU6-1034P GC17P029533
GH17F029376 1.2 FANTOM5 Ensembl ENCODE 0.4 -11.7 -11741 1.2 JUND SMARCA4 GLIS1 ZNF341 SCRT2 ZNF600 FOS PRDM1 TP53I13 MYO18A TAOK1 TIAF1 GIT1 RNU4-34P GC17M029364
GH17F029384 0.5 ENCODE 0.8 -3.4 -3371 1.1 CTCF ZNF316 RFX1 RNU4-34P GC17M029364
GH17F029383 0.4 ENCODE 0.8 -4.6 -4594 1.1 ZNF121 ZBTB33 LOC105371931 ANKRD13B RNU4-34P GC17M029364
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU4-34P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU4-34P Gene

Chromosome:
17
Start:
29,388,560 bp from pter
End:
29,388,683 bp from pter
Size:
124 bases
Orientation:
Plus strand

Genomic View for RNU4-34P Gene

Genes around RNU4-34P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU4-34P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU4-34P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU4-34P Gene

Proteins for RNU4-34P Gene

Post-translational modifications for RNU4-34P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU4-34P Gene

Domains & Families for RNU4-34P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU4-34P Gene

Function for RNU4-34P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU4-34P Gene

Localization for RNU4-34P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU4-34P Gene

Pathways & Interactions for RNU4-34P Gene

SuperPathways for RNU4-34P Gene

No Data Available

Interacting Proteins for RNU4-34P Gene

Gene Ontology (GO) - Biological Process for RNU4-34P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU4-34P Gene

Transcripts for RNU4-34P Gene

mRNA/cDNA for RNU4-34P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU4-34P Gene

No ASD Table

Relevant External Links for RNU4-34P Gene

GeneLoc Exon Structure for
RNU4-34P
ECgene alternative splicing isoforms for
RNU4-34P

Expression for RNU4-34P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU4-34P Gene

genes like me logo Genes that share expression patterns with RNU4-34P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU4-34P Gene

Orthologs for RNU4-34P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU4-34P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U4 35
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26425 35
  • 74 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia U4 35
  • 69 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia U4 35
  • 54 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U4 35
  • 46 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U4 35
  • 66 (a)
OneToMany
Species where no ortholog for RNU4-34P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU4-34P Gene

ENSEMBL:
Gene Tree for RNU4-34P (if available)
TreeFam:
Gene Tree for RNU4-34P (if available)

Paralogs for RNU4-34P Gene

No data available for Paralogs for RNU4-34P Gene

Variants for RNU4-34P Gene

Relevant External Links for RNU4-34P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU4-34P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU4-34P Gene

Disorders for RNU4-34P Gene

No disorders were found for RNU4-34P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU4-34P Gene

Publications for RNU4-34P Gene

No publications were found for RNU4-34P Gene.

Products for RNU4-34P Gene

Sources for RNU4-34P Gene

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