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Aliases for RNU4-16P Gene

Subcategory (RNA class) for RNU4-16P Gene


Aliases for RNU4-16P Gene

  • RNA, U4 Small Nuclear 16, Pseudogene 2 3 5

External Ids for RNU4-16P Gene

ORGUL Members for RNU4-16P Gene

Previous GeneCards Identifiers for RNU4-16P Gene

  • GC07P094730

Summaries for RNU4-16P Gene

GeneCards Summary for RNU4-16P Gene

RNU4-16P (RNA, U4 Small Nuclear 16, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU4-16P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU4-16P Gene

Genomics for RNU4-16P Gene

Regulatory Elements for RNU4-16P Gene

Enhancers for RNU4-16P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H095066 1.1 ENCODE dbSUPER 11.4 -30.9 -30860 1 ELF3 PKNOX1 FOXA2 ZNF133 FEZF1 ZIC2 HIC1 CTBP1 POLR2A ZSCAN5C RNU4-16P PPP1R9A GC07P095099 HINT1P2
GH07H095246 1.1 Ensembl ENCODE 9.4 +148.8 148810 0 CTCF PKNOX1 RB1 FEZF1 ZNF2 RAD21 POLR2A ZNF366 SMC3 ZNF143 PON1 PON3 RNU4-16P GC07M095243 GC07P095276
GH07H095046 0.8 ENCODE dbSUPER 11.7 -50.9 -50912 2 OSR2 KLF1 SPI1 FOXP1 RNU4-16P PPP1R9A HINT1P2 GC07P095099
GH07H095055 0.7 ENCODE dbSUPER 11.7 -40.9 -40925 3 PRDM6 BCL6B ZNF843 RNU4-16P PEG10 HINT1P2 GC07P095099
GH07H095040 0.6 ENCODE dbSUPER 10.5 -57.0 -56957 2 PRDM1 RNU4-16P PPP1R9A HINT1P2 GC07P095099
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU4-16P on UCSC Golden Path with GeneCards custom track

Genomic Location for RNU4-16P Gene

95,098,227 bp from pter
95,098,367 bp from pter
141 bases
Plus strand

Genomic View for RNU4-16P Gene

Genes around RNU4-16P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU4-16P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU4-16P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU4-16P Gene

Proteins for RNU4-16P Gene

Post-translational modifications for RNU4-16P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU4-16P Gene

Domains & Families for RNU4-16P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU4-16P Gene

Function for RNU4-16P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU4-16P Gene

Localization for RNU4-16P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU4-16P Gene

Pathways & Interactions for RNU4-16P Gene

SuperPathways for RNU4-16P Gene

No Data Available

Interacting Proteins for RNU4-16P Gene

Gene Ontology (GO) - Biological Process for RNU4-16P Gene


No data available for Pathways by source and SIGNOR curated interactions for RNU4-16P Gene

Drugs & Compounds for RNU4-16P Gene

No Compound Related Data Available

Transcripts for RNU4-16P Gene

mRNA/cDNA for RNU4-16P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU4-16P Gene

No ASD Table

Relevant External Links for RNU4-16P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNU4-16P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU4-16P Gene

genes like me logo Genes that share expression patterns with RNU4-16P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU4-16P Gene

Orthologs for RNU4-16P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU4-16P Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia U4 34
  • 99 (a)
(Ornithorhynchus anatinus)
Mammalia U4 34
  • 85 (a)
(Monodelphis domestica)
Mammalia U4 34
  • 83 (a)
(Danio rerio)
Actinopterygii U4 34 34 34
  • 82 (a)
Species where no ortholog for RNU4-16P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU4-16P Gene

Gene Tree for RNU4-16P (if available)
Gene Tree for RNU4-16P (if available)

Paralogs for RNU4-16P Gene

No data available for Paralogs for RNU4-16P Gene

Variants for RNU4-16P Gene

Relevant External Links for RNU4-16P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU4-16P Gene

Disorders for RNU4-16P Gene

No disorders were found for RNU4-16P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU4-16P Gene

Publications for RNU4-16P Gene

No publications were found for RNU4-16P Gene.

Products for RNU4-16P Gene

Sources for RNU4-16P Gene

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