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Aliases for RNU2-7P Gene

Subcategory (RNA class) for RNU2-7P Gene

snRNA

Aliases for RNU2-7P Gene

  • RNA, U2 Small Nuclear 7, Pseudogene 2 3 5

External Ids for RNU2-7P Gene

ORGUL Members for RNU2-7P Gene

Previous GeneCards Identifiers for RNU2-7P Gene

  • GC00U933674
  • GC13P021187

Summaries for RNU2-7P Gene

GeneCards Summary for RNU2-7P Gene

RNU2-7P (RNA, U2 Small Nuclear 7, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU2-7P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU2-7P Gene

Genomics for RNU2-7P Gene

GeneHancer (GH) Regulatory Elements for RNU2-7P Gene

Promoters and enhancers for RNU2-7P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I020772 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12 +161.3 161274 2.3 HDGF PKNOX1 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B EEF1AKMT1 ZMYM5 SLC35E1P1 RNU2-7P RPS7P10 IFT88 ZMYM2 CRYL1 XPO4 ENSG00000275485
GH13I019860 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 9.7 -749.1 -749092 4.9 HDGF PKNOX1 ARID4B NEUROD1 SIN3A ZNF2 YY1 SLC30A9 POLR2B ZNF143 ZMYM5 ENSG00000275964 ZMYM2 MPHOSPH8 PSPC1-AS2 ESRRAP1 RNU2-7P TPTE2 CRYL1 ENSG00000223576
GH13I020118 Enhancer 1.5 FANTOM5 Ensembl ENCODE 9.7 -492.2 -492240 3.8 PKNOX1 CLOCK FOXA2 SIN3A ZNF2 YY1 ZNF121 GLIS2 FOS SP3 LOC105370101 ZMYM5 ZMYM2 XPO4 MPHOSPH8 RNU2-7P GJA3 PSPC1 CRYL1 LINC01072
GH13I021068 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.1 +458.4 458422 3.2 SIN3A RFX5 ZNF366 RCOR1 FOS RUNX3 THAP11 USF2 CEBPB ZNF217 RNU2-7P LATS2 CRYL1 LOC105370104 RPS12P23
GH13I021010 Enhancer 1.3 Ensembl ENCODE dbSUPER 10 +402.4 402369 8.5 PKNOX1 FOXA2 ZFP64 ZNF133 ARID4B FEZF1 YY1 ZNF121 GLIS2 ZNF213 RPS7P10 RNU2-7P LATS2 LATS2-AS1 RNU4-9P GC13M021039
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU2-7P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU2-7P Gene

Genomic Locations for RNU2-7P Gene
chr13:20,612,161-20,612,338
(GRCh38/hg38)
Size:
178 bases
Orientation:
Plus strand
chr13:21,186,300-21,186,477
(GRCh37/hg19)

Genomic View for RNU2-7P Gene

Genes around RNU2-7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-7P Gene

Proteins for RNU2-7P Gene

Post-translational modifications for RNU2-7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-7P Gene

Domains & Families for RNU2-7P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU2-7P Gene

Function for RNU2-7P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-7P Gene

Localization for RNU2-7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-7P Gene

Pathways & Interactions for RNU2-7P Gene

SuperPathways for RNU2-7P Gene

No Data Available

Interacting Proteins for RNU2-7P Gene

Gene Ontology (GO) - Biological Process for RNU2-7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-7P Gene

Drugs & Compounds for RNU2-7P Gene

No Compound Related Data Available

Transcripts for RNU2-7P Gene

mRNA/cDNA for RNU2-7P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-7P Gene

No ASD Table

Relevant External Links for RNU2-7P Gene

GeneLoc Exon Structure for
RNU2-7P
ECgene alternative splicing isoforms for
RNU2-7P

Expression for RNU2-7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU2-7P Gene

mRNA differential expression in normal tissues according to GTEx for RNU2-7P Gene

This gene is overexpressed in Pituitary (x4.3).
genes like me logo Genes that share expression patterns with RNU2-7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-7P Gene

Orthologs for RNU2-7P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-7P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U2 34
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia U2 34
  • 75 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia U2 34 34
  • 66 (a)
ManyToMany
Species where no ortholog for RNU2-7P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU2-7P Gene

ENSEMBL:
Gene Tree for RNU2-7P (if available)
TreeFam:
Gene Tree for RNU2-7P (if available)

Paralogs for RNU2-7P Gene

No data available for Paralogs for RNU2-7P Gene

Variants for RNU2-7P Gene

Additional Variant Information for RNU2-7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-7P Gene

Disorders for RNU2-7P Gene

No disorders were found for RNU2-7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-7P Gene

Publications for RNU2-7P Gene

No publications were found for RNU2-7P Gene.

Products for RNU2-7P Gene

Sources for RNU2-7P Gene

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