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Aliases for RNU2-62P Gene

Subcategory (RNA class) for RNU2-62P Gene

snRNA

Aliases for RNU2-62P Gene

  • RNA, U2 Small Nuclear 62, Pseudogene 2 3 5

External Ids for RNU2-62P Gene

ORGUL Members for RNU2-62P Gene

Previous GeneCards Identifiers for RNU2-62P Gene

  • GC06M027079
  • GC00U934783

Summaries for RNU2-62P Gene

GeneCards Summary for RNU2-62P Gene

RNU2-62P (RNA, U2 Small Nuclear 62, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

Additional gene information for RNU2-62P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU2-62P Gene

Genomics for RNU2-62P Gene

GeneHancer (GH) Regulatory Elements for RNU2-62P Gene

Promoters and enhancers for RNU2-62P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I027126 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE dbSUPER 12.4 -28.0 -28042 23 CLOCK FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC HIST1H2AH GC06P027140 HIST1H2AG HIST1H4I HIST1H2BJ HIST1H2BK ZKSCAN8 ABT1 HMGN4 BTN2A1
GH06I027078 Enhancer 1.1 Ensembl ENCODE 12.8 +31.1 31073 0.6 CLOCK ATF1 ARNT ARID4B SIN3A ZNF2 E2F8 ARID2 ZNF143 RUNX3 RNU2-62P ABT1 VN1R11P VN1R13P
GH06I027114 Enhancer 0.9 ENCODE 0.4 -5.1 -5100 0.9 PKNOX1 ATF1 ARNT YY1 ZNF280A TCF12 ZNF766 FOS ATF7 NCOA1 HIST1H2BK ABT1 GC06M027113 RNU2-62P ENSG00000272468
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU2-62P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU2-62P Gene

Genomic Locations for RNU2-62P Gene
chr6:27,109,790-27,109,980
(GRCh38/hg38)
Size:
191 bases
Orientation:
Minus strand

Genomic View for RNU2-62P Gene

Genes around RNU2-62P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-62P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-62P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-62P Gene

Proteins for RNU2-62P Gene

Post-translational modifications for RNU2-62P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-62P Gene

Domains & Families for RNU2-62P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU2-62P Gene

Function for RNU2-62P Gene

Phenotypes From GWAS Catalog for RNU2-62P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-62P Gene

Localization for RNU2-62P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-62P Gene

Pathways & Interactions for RNU2-62P Gene

SuperPathways for RNU2-62P Gene

No Data Available

Interacting Proteins for RNU2-62P Gene

Gene Ontology (GO) - Biological Process for RNU2-62P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-62P Gene

Drugs & Compounds for RNU2-62P Gene

No Compound Related Data Available

Transcripts for RNU2-62P Gene

mRNA/cDNA for RNU2-62P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-62P Gene

No ASD Table

Relevant External Links for RNU2-62P Gene

GeneLoc Exon Structure for
RNU2-62P
ECgene alternative splicing isoforms for
RNU2-62P

Expression for RNU2-62P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU2-62P Gene

genes like me logo Genes that share expression patterns with RNU2-62P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-62P Gene

Orthologs for RNU2-62P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-62P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U2 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U2 34 34
  • 77 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Gm24623 34
  • 72 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U2 34 34
  • 78 (a)
ManyToMany
Species where no ortholog for RNU2-62P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU2-62P Gene

ENSEMBL:
Gene Tree for RNU2-62P (if available)
TreeFam:
Gene Tree for RNU2-62P (if available)

Paralogs for RNU2-62P Gene

No data available for Paralogs for RNU2-62P Gene

Variants for RNU2-62P Gene

Additional Variant Information for RNU2-62P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-62P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-62P Gene

Disorders for RNU2-62P Gene

No disorders were found for RNU2-62P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-62P Gene

Publications for RNU2-62P Gene

No publications were found for RNU2-62P Gene.

Products for RNU2-62P Gene

Sources for RNU2-62P Gene

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