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Aliases for RNU2-56P Gene

Subcategory (RNA class) for RNU2-56P Gene

snRNA

Aliases for RNU2-56P Gene

  • RNA, U2 Small Nuclear 56, Pseudogene 2 3

External Ids for RNU2-56P Gene

ORGUL Members for RNU2-56P Gene

Previous GeneCards Identifiers for RNU2-56P Gene

  • GC20M018248
  • GC00U934521

Summaries for RNU2-56P Gene

GeneCards Summary for RNU2-56P Gene

RNU2-56P (RNA, U2 Small Nuclear 56, Pseudogene) is a Pseudogene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for RNU2-56P Gene

  • U2 spliceosomal RNA: U2 is a small nuclear RNA (snRNA) component of the spliceosome (involved in pre-mRNA splicing). Complementary binding between U2 snRNA (in an area lying towards the 5' end but 3' to hairpin I) and the branchpoint sequence (BPS) of the intron results in the bulging out of an unpaired adenosine, on the BPS, which initiates a nucleophilic attack at the intronic 5' splice site, thus starting the first of two transesterification reactions that mediate splicing.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RNU2-56P Gene

Genomics for RNU2-56P Gene

Genomic Location for RNU2-56P Gene

Chromosome:
20
Start:
18,265,690 bp from pter
End:
18,265,879 bp from pter
Size:
190 bases
Orientation:
Minus strand

Genomic View for RNU2-56P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNU2-56P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements and RefSeq DNA sequence for RNU2-56P Gene

Proteins for RNU2-56P Gene

Post-translational modifications for RNU2-56P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-56P Gene

Domains & Families for RNU2-56P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU2-56P Gene

Function for RNU2-56P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-56P Gene

Localization for RNU2-56P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU2-56P Gene

Pathways & Interactions for RNU2-56P Gene

SuperPathways for RNU2-56P Gene

No Data Available

Interacting Proteins for RNU2-56P Gene

Gene Ontology (GO) - Biological Process for RNU2-56P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-56P Gene

Drugs & Compounds for RNU2-56P Gene

No Compound Related Data Available

Transcripts for RNU2-56P Gene

mRNA/cDNA for RNU2-56P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-56P Gene

No ASD Table

Relevant External Links for RNU2-56P Gene

GeneLoc Exon Structure for
RNU2-56P
ECgene alternative splicing isoforms for
RNU2-56P

Expression for RNU2-56P Gene

mRNA expression in normal human tissues for RNU2-56P Gene

genes like me logo Genes that share expression patterns with RNU2-56P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNU2-56P Gene

Orthologs for RNU2-56P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-56P Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia U2 36
  • 81 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia U2 36
  • 99 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia U2 36
  • 79 (a)
ManyToMany
U2 36
  • 80 (a)
ManyToMany
Species with no ortholog for RNU2-56P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU2-56P Gene

ENSEMBL:
Gene Tree for RNU2-56P (if available)
TreeFam:
Gene Tree for RNU2-56P (if available)

Paralogs for RNU2-56P Gene

No data available for Paralogs for RNU2-56P Gene

Variants for RNU2-56P Gene

Relevant External Links for RNU2-56P Gene

HapMap Linkage Disequilibrium report
RNU2-56P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-56P Gene

Disorders for RNU2-56P Gene

genes like me logo Genes that share disorders with RNU2-56P: view

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-56P Gene

Publications for RNU2-56P Gene

No publications were found for RNU2-56P Gene.

Products for RNU2-56P Gene

Sources for RNU2-56P Gene

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