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Aliases for RNU2-31P Gene

Aliases for RNU2-31P Gene

  • RNA, U2 Small Nuclear 31, Pseudogene 2 3 5

External Ids for RNU2-31P Gene

Previous GeneCards Identifiers for RNU2-31P Gene

  • GC03M159528
  • GC00U935263

Summaries for RNU2-31P Gene

GeneCards Summary for RNU2-31P Gene

RNU2-31P (RNA, U2 Small Nuclear 31, Pseudogene) is a Pseudogene.

Additional gene information for RNU2-31P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU2-31P Gene

Genomics for RNU2-31P Gene

GeneHancer (GH) Regulatory Elements for RNU2-31P Gene

Promoters and enhancers for RNU2-31P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I159807 Enhancer 0.4 ENCODE dbSUPER 550.8 +0.5 524 0.9 RNU2-31P LOC101928351 IQCJ-SCHIP1-AS1 SCHIP1 IQCJ-SCHIP1
GH03I159774 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.4 +32.5 32495 2.6 KLF17 SIN3A FEZF1 ZNF335 GLIS2 ZNF366 SCRT2 EGR2 USF2 ZEB2 RNU2-31P IQCJ-SCHIP1 IQCJ-SCHIP1-AS1 SCHIP1
GH03I159783 Enhancer 1.4 Ensembl ENCODE dbSUPER 11.6 +21.7 21688 7.5 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 GLI4 ZNF2 YY1 GLIS2 FOS RNU2-31P IQCJ-SCHIP1 IQCJ-SCHIP1-AS1 SCHIP1
GH03I159828 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.7 -21.3 -21291 2.8 FOXA2 FEZF1 ZNF2 YY1 ZNF121 ZNF213 KLF7 FOS ZNF214 DEK IFT80 RNU2-31P IL12A SMC4 IQCJ-SCHIP1-AS1 LOC101928351 SCHIP1 IQCJ-SCHIP1
GH03I159273 Promoter 0.9 EPDnew 10.3 +535.3 535287 0.1 ZBTB21 ATF2 ZNF366 ZNF629 ATF7 RCOR1 ZBTB17 CHD2 SCHIP1 IQCJ-SCHIP1 RNU2-31P MIR3919
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RNU2-31P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RNU2-31P Gene

Genomic Locations for RNU2-31P Gene
chr3:159,808,416-159,808,570
(GRCh38/hg38)
Size:
155 bases
Orientation:
Minus strand

Genomic View for RNU2-31P Gene

Genes around RNU2-31P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU2-31P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU2-31P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU2-31P Gene

Proteins for RNU2-31P Gene

Post-translational modifications for RNU2-31P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU2-31P Gene

Domains & Families for RNU2-31P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU2-31P Gene

Function for RNU2-31P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU2-31P Gene

Localization for RNU2-31P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RNU2-31P Gene

Pathways & Interactions for RNU2-31P Gene

SuperPathways for RNU2-31P Gene

No Data Available

Interacting Proteins for RNU2-31P Gene

Gene Ontology (GO) - Biological Process for RNU2-31P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU2-31P Gene

Drugs & Compounds for RNU2-31P Gene

No Compound Related Data Available

Transcripts for RNU2-31P Gene

mRNA/cDNA for RNU2-31P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU2-31P Gene

No ASD Table

Relevant External Links for RNU2-31P Gene

GeneLoc Exon Structure for
RNU2-31P
ECgene alternative splicing isoforms for
RNU2-31P

Expression for RNU2-31P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNU2-31P Gene

genes like me logo Genes that share expression patterns with RNU2-31P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNU2-31P Gene

Orthologs for RNU2-31P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU2-31P Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia U2 34
  • 54 (a)
OneToOne
dog
(Canis familiaris)
Mammalia U2 34
  • 48 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25560 34
  • 48 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U2 34
  • 42 (a)
OneToOne
chicken
(Gallus gallus)
Aves U2 34
  • 42 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea U2 34 34 34 34
  • 42 (a)
ManyToMany
Species where no ortholog for RNU2-31P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNU2-31P Gene

ENSEMBL:
Gene Tree for RNU2-31P (if available)
TreeFam:
Gene Tree for RNU2-31P (if available)

Paralogs for RNU2-31P Gene

No data available for Paralogs for RNU2-31P Gene

Variants for RNU2-31P Gene

Additional Variant Information for RNU2-31P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU2-31P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU2-31P Gene

Disorders for RNU2-31P Gene

No disorders were found for RNU2-31P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU2-31P Gene

Publications for RNU2-31P Gene

No publications were found for RNU2-31P Gene.

Products for RNU2-31P Gene

Sources for RNU2-31P Gene

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