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Aliases for RNU1-92P Gene

Aliases for RNU1-92P Gene

  • RNA, U1 Small Nuclear 92, Pseudogene 2 3 5

External Ids for RNU1-92P Gene

Previous GeneCards Identifiers for RNU1-92P Gene

  • GC01M149218
  • GC00U935258

Summaries for RNU1-92P Gene

GeneCards Summary for RNU1-92P Gene

RNU1-92P (RNA, U1 Small Nuclear 92, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNU1-92P Gene

Genomics for RNU1-92P Gene

Regulatory Elements for RNU1-92P Gene

Enhancers for RNU1-92P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F143719 1.4 FANTOM5 ENCODE 0.8 0.0 -2 1.9 PKNOX1 ATF1 ARNT FEZF1 ZNF2 GLIS2 GATA2 KDM4B ZNF263 SP3 RNU1-92P RNVU1-18
GH01F143727 1.2 ENCODE 0.4 -8.6 -8599 3.0 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF416 ZNF143 PFN1P6 RNVU1-18 ENSG00000224363 HIST2H3PS2 LOC645166 RNU1-92P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNU1-92P on UCSC Golden Path with GeneCards custom track

Promoters for RNU1-92P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001749458 -156 801 PKNOX1 ATF1 ARNT FEZF1 ZNF2 GATA2 KDM4B ZNF263 SP3 GTF2B

Genomic Location for RNU1-92P Gene

Chromosome:
1
Start:
143,720,510 bp from pter
End:
143,720,644 bp from pter
Size:
135 bases
Orientation:
Minus strand

Genomic View for RNU1-92P Gene

Genes around RNU1-92P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNU1-92P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNU1-92P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNU1-92P Gene

Proteins for RNU1-92P Gene

Post-translational modifications for RNU1-92P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNU1-92P Gene

Domains & Families for RNU1-92P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNU1-92P Gene

Function for RNU1-92P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNU1-92P Gene

Localization for RNU1-92P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNU1-92P Gene

Pathways & Interactions for RNU1-92P Gene

SuperPathways for RNU1-92P Gene

No Data Available

Interacting Proteins for RNU1-92P Gene

Gene Ontology (GO) - Biological Process for RNU1-92P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNU1-92P Gene

Transcripts for RNU1-92P Gene

mRNA/cDNA for RNU1-92P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNU1-92P Gene

No ASD Table

Relevant External Links for RNU1-92P Gene

GeneLoc Exon Structure for
RNU1-92P
ECgene alternative splicing isoforms for
RNU1-92P

Expression for RNU1-92P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNU1-92P Gene

genes like me logo Genes that share expression patterns with RNU1-92P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNU1-92P Gene

Orthologs for RNU1-92P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RNU1-92P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U1 35
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia U1 35
  • 63 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm23735 35
  • 53 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia U1 35
  • 51 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia U1 35
  • 30 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia U1 35
  • 47 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii U1 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35
  • 40 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea U1 35
  • 8 (a)
OneToMany
Species where no ortholog for RNU1-92P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RNU1-92P Gene

ENSEMBL:
Gene Tree for RNU1-92P (if available)
TreeFam:
Gene Tree for RNU1-92P (if available)

Paralogs for RNU1-92P Gene

No data available for Paralogs for RNU1-92P Gene

Variants for RNU1-92P Gene

Relevant External Links for RNU1-92P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNU1-92P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNU1-92P Gene

Disorders for RNU1-92P Gene

No disorders were found for RNU1-92P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNU1-92P Gene

Publications for RNU1-92P Gene

No publications were found for RNU1-92P Gene.

Products for RNU1-92P Gene

Sources for RNU1-92P Gene

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